# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_1.swc.swc created with StdSwc version 1.31 on 5/17/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\Animal_1_Basal_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  47.84  146.47  6.29
4.3  Radius of line 2 at 2.02476 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.1  146.36  6.36
4.5  Radius of terminal line 123 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  74.68  134.05  4.21
4.5  Radius of terminal line 738 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.22  49.81  4.08
4.5  Radius of terminal line 895 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.33  15.18  1.55
4.5  Radius of terminal line 909 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.63  48.97  5.25
4.5  Radius of terminal line 1030 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  204.2  38.14  2.59
4.5  Radius of terminal line 1045 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.02  48.79  4.87
4.5  Radius of terminal line 1116 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.38  89.17  3.32
4.5  Radius of terminal line 1264 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  184.66  96.64  2.44
4.5  Radius of terminal line 1335 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.98  97.11  1.25
4.5  Radius of terminal line 1367 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.08  114.36  3.48
4.5  Radius of terminal line 1394 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.44  122.31  1.25
4.5  Radius of terminal line 1418 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  113.06  127.69  5.7
4.5  Radius of terminal line 1430 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.37  126.29  3.85
4.5  Radius of terminal line 1439 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  106.55  127.58  2.28
4.5  Radius of terminal line 1483 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.26  138.71  1.25
4.5  Radius of terminal line 1517 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  99.38  133.22  4.07
4.5  Radius of terminal line 1526 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  90.67  135.33  4.02
4.5  Radius of terminal line 1893 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  141.37  85.33  3.03
4.5  Radius of terminal line 2240 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.48  137.03  1.55
4.5  Radius of terminal line 2272 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.63  153.55  4.96
4.5  Radius of terminal line 2450 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  132.39  175.71  6.29
4.5  Radius of terminal line 2565 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  78.22  135.72  1.55
4.5  Radius of terminal line 3055 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.15  56.64  2.7
4.5  Radius of terminal line 3242 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.28  39.19  4.07
4.5  Radius of terminal line 3310 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.02  27.99  4.07
4.5  Radius of terminal line 3338 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  120.3  50.21  0.07
4.5  Radius of terminal line 3546 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.33  90.21  1.55
4.5  Radius of terminal line 3711 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  77.06  113.42  3.33
4.5  Radius of terminal line 3750 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  65.03  136.32  2.73
4.5  Radius of terminal line 3792 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.48  138.51  2.29
4.5  Radius of terminal line 3855 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  56.36  135.47  0.07
4.3  Radius of line 3856 at 2.56058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.84  146.47  6.29
4.3  Radius of line 3857 at 2.47789 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.03  145.99  6.41
4.3  Radius of line 3858 at 1.83275 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.14  145.61  6.45
4.3  Radius of line 3859 at 0.953125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.18  145.29  6.45
4.5  Radius of terminal line 4224 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  69.11  57.8  1.55
4.5  Radius of terminal line 4404 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  37.14  81.92  4.51
4.5  Radius of terminal line 4439 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.8  93.68  0.07
4.5  Radius of terminal line 4451 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  43.18  97.62  4.15
4.5  Radius of terminal line 4511 at 0.07405 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  49.79  129.09  1.13
2.5  Seg length ending at pt. 1031 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  179.21  49.9  3.64
2.5  Seg length ending at pt. 1419 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  107.65  127.43  3.45
2.5  Seg length ending at pt. 1518 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  91.22  134.51  3.22
2.5  Seg length ending at pt. 1894 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  75.12  135.68  4.41
2.5  Seg length ending at pt. 3311 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  116.83  55.61  2.21
2.5  Seg length ending at pt. 3793 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  48.72  145.86  6.45
2.5  Seg length ending at pt. 3856 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  47.84  146.47  6.29
2.4  Seg length ending at pt. 3857 >= 6.0 stdevs above mean at 0.53.  (no action taken)
     B1      X, Y, Z:  48.03  145.99  6.41
2.6  Line 4 and line 2567 have the same coordinates.  (second line removed)
     A      X, Y, Z:  48.38  146.24  6.43
2.6  Line 12 and line 2452 have the same coordinates.  (second line removed)
     A      X, Y, Z:  50.31  145.43  6.45
2.6  Line 112 and line 125 have the same coordinates.  (second line removed)
     A      X, Y, Z:  74.81  135.74  4.49
2.6  Line 168 and line 1528 have the same coordinates.  (second line removed)
     A      X, Y, Z:  86.04  132.47  3.03
2.6  Line 182 and line 1441 have the same coordinates.  (second line removed)
     A      X, Y, Z:  89.08  133.49  3.91
2.6  Line 251 and line 1432 have the same coordinates.  (second line removed)
     A      X, Y, Z:  106.85  127.7  3.5
2.6  Line 254 and line 1396 have the same coordinates.  (second line removed)
     A      X, Y, Z:  107.35  127.51  3.4
2.6  Line 286 and line 1369 have the same coordinates.  (second line removed)
     A      X, Y, Z:  114.99  127.27  3.84
2.6  Line 326 and line 1337 have the same coordinates.  (second line removed)
     A      X, Y, Z:  121.21  119.51  3.61
2.6  Line 398 and line 1266 have the same coordinates.  (second line removed)
     A      X, Y, Z:  134.01  105.44  1.61
2.6  Line 483 and line 1118 have the same coordinates.  (second line removed)
     A      X, Y, Z:  157.51  101.18  1.63
2.6  Line 489 and line 1047 have the same coordinates.  (second line removed)
     A      X, Y, Z:  158.6  100.68  1.48
2.6  Line 731 and line 740 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.05  50.15  3.6
2.6  Line 740 and line 910 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  179.21  49.9  3.64
2.6  Line 744 and line 897 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.54  49.41  3.61
2.6  Line 1450 and line 1485 have the same coordinates.  (second line removed)
     A      X, Y, Z:  90.95  134.39  3.21
2.6  Line 1991 and line 2274 have the same coordinates.  (second line removed)
     A      X, Y, Z:  99.23  147.1  2.97
2.6  Line 2059 and line 2242 have the same coordinates.  (second line removed)
     A      X, Y, Z:  112.48  151.24  2.82
2.6  Line 2578 and line 3548 have the same coordinates.  (second line removed)
     A      X, Y, Z:  50.76  143.51  6.44
2.6  Line 2741 and line 3340 have the same coordinates.  (second line removed)
     A      X, Y, Z:  76.64  110.61  2.54
2.6  Line 3048 and line 3057 have the same coordinates.  (second line removed)
     A      X, Y, Z:  116.55  55.73  2.26
2.6  Line 3152 and line 3244 have the same coordinates.  (second line removed)
     A      X, Y, Z:  133.6  39.09  3.9
2.6  Line 3552 and line 3752 have the same coordinates.  (second line removed)
     A      X, Y, Z:  51.59  142.7  6.21
2.6  Line 3597 and line 3713 have the same coordinates.  (second line removed)
     A      X, Y, Z:  57.6  134.62  1.76
2.6  Line 3869 and line 4453 have the same coordinates.  (second line removed)
     A      X, Y, Z:  48.31  142.59  6.45
2.6  Line 3943 and line 4226 have the same coordinates.  (second line removed)
     A      X, Y, Z:  53.78  123.25  4.18
2.6  Line 4325 and line 4406 have the same coordinates.  (second line removed)
     A      X, Y, Z:  42.4  98.51  3.32
2.6  Line 4409 and line 4441 have the same coordinates.  (second line removed)
     A      X, Y, Z:  41.95  97.71  3.16
4.4  Line 111 of rad 0.180537 links to 110 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  74.66  135.77  4.53
4.4  Line 125 of rad 0.5 links to 111 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  75.12  135.68  4.41
4.4  Line 166 of rad 0.233781 links to 165 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  85.76  132.48  3.09
4.4  Line 167 of rad 0.5 links to 166 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  85.9  132.48  3.06
4.4  Line 180 of rad 0.233781 links to 179 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  88.81  133.39  4.1
4.4  Line 181 of rad 0.5 links to 180 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  88.94  133.44  4.0
4.4  Line 252 of rad 0.233781 links to 251 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  107.1  127.6  3.43
4.4  Line 253 of rad 0.5 links to 252 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  107.23  127.56  3.42
4.4  Line 284 of rad 0.180537 links to 283 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  114.81  127.47  3.91
4.4  Line 285 of rad 0.5 links to 284 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  114.9  127.37  3.88
4.4  Line 324 of rad 0.233781 links to 323 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  121.17  119.65  3.83
4.4  Line 325 of rad 0.5 links to 324 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  121.19  119.58  3.72
4.4  Line 397 of rad 0.5 links to 396 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  133.9  105.55  1.63
4.4  Line 481 of rad 0.233781 links to 480 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  157.27  101.25  1.58
4.4  Line 482 of rad 0.5 links to 481 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  157.39  101.21  1.6
4.4  Line 487 of rad 0.233781 links to 486 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  158.38  100.79  1.57
4.4  Line 488 of rad 0.5 links to 487 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  158.49  100.73  1.52
4.4  Line 730 of rad 0.180537 links to 729 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  178.99  50.28  3.59
4.4  Line 740 of rad 0.5 links to 730 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  179.21  49.9  3.64
4.4  Line 910 of rad 0.5 links to 741 of rad 0.233782.  (no action taken)
     B1      X, Y, Z:  179.21  49.9  3.64
4.4  Line 1448 of rad 0.180537 links to 1447 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  90.68  134.25  3.21
4.4  Line 1449 of rad 0.5 links to 1448 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  90.82  134.32  3.21
4.4  Line 1989 of rad 0.233781 links to 1988 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  98.99  146.98  3.01
4.4  Line 1990 of rad 0.5 links to 1989 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  99.11  147.04  2.99
4.4  Line 2057 of rad 0.233781 links to 2056 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  112.3  151.21  2.98
4.4  Line 2058 of rad 0.5 links to 2057 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  112.39  151.23  2.9
4.4  Line 2739 of rad 0.233781 links to 2738 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  76.4  110.82  2.57
4.4  Line 2740 of rad 0.5 links to 2739 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  76.52  110.72  2.55
4.4  Line 3057 of rad 0.5 links to 3047 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  116.83  55.61  2.21
4.4  Line 3150 of rad 0.233781 links to 3149 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  133.33  39.17  3.91
4.4  Line 3151 of rad 0.5 links to 3150 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  133.47  39.13  3.9
4.4  Line 3551 of rad 0.5 links to 3550 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  51.49  142.8  6.23
4.4  Line 3595 of rad 0.233781 links to 3594 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  57.48  134.78  1.9
4.4  Line 3596 of rad 0.5 links to 3595 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  57.54  134.7  1.83
4.4  Line 3941 of rad 0.180537 links to 3940 of rad 0.07405.  (no action taken)
     B1      X, Y, Z:  53.82  123.47  4.34
4.4  Line 3942 of rad 0.5 links to 3941 of rad 0.180537.  (no action taken)
     B1      X, Y, Z:  53.8  123.36  4.26
4.4  Line 4323 of rad 0.233781 links to 4322 of rad 0.100672.  (no action taken)
     B1      X, Y, Z:  42.52  98.74  3.34
4.4  Line 4324 of rad 0.5 links to 4323 of rad 0.233781.  (no action taken)
     B1      X, Y, Z:  42.46  98.63  3.33
 
 


Number of type A irregularities = 34
Number of type B1 irregularities = 82
Number of type B2 irregularities = 0
Number of type C irregularities = 0
