# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\neuron.ims.swc.swc created with StdSwc version 1.31 on 4/15/17.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\neuron.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  119.59  78.54  15.07
2.5  Seg length ending at pt. 87 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  120.76  88.6  7.97
2.5  Seg length ending at pt. 153 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  120.67  95.37  7.21
2.5  Seg length ending at pt. 172 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  120.96  97.4  10.36
2.5  Seg length ending at pt. 174 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  120.95  97.53  10.48
2.5  Seg length ending at pt. 225 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  117.94  103.09  8.6
2.5  Seg length ending at pt. 781 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  117.58  83.73  6.45
2.5  Seg length ending at pt. 1128 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  76.89  93.94  6.03
2.5  Seg length ending at pt. 1177 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  70.94  94.74  5.52
2.5  Seg length ending at pt. 1194 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  70.4  95.18  4.54
2.5  Seg length ending at pt. 1245 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  65.98  99.96  4.3
2.5  Seg length ending at pt. 1358 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  56.31  94.26  0.67
2.5  Seg length ending at pt. 1360 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  56.24  94.08  0.68
2.5  Seg length ending at pt. 1375 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  55.29  92.43  0.85
2.5  Seg length ending at pt. 1731 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  43.95  78.79  9.69
2.4  Seg length ending at pt. 1879 >= 6.0 stdevs above mean at 0.8042.  (no action taken)
     B1      X, Y, Z:  41.29  84.53  1.45
2.4  Seg length ending at pt. 1918 >= 6.0 stdevs above mean at 0.7528.  (no action taken)
     B1      X, Y, Z:  49.29  79.9  8.9
2.5  Seg length ending at pt. 2117 <= 0.1 at 0.0721.  (removed)
     A       X, Y, Z:  57.01  103.68  3.14
2.5  Seg length ending at pt. 2608 <= 0.1 at 0.0735.  (removed)
     A       X, Y, Z:  3.61  120.67  3.44
2.5  Seg length ending at pt. 2796 <= 0.1 at 0.0954.  (removed)
     A       X, Y, Z:  44.58  109.58  1.11
2.5  Seg length ending at pt. 2798 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  44.42  109.59  1.03
2.5  Seg length ending at pt. 2825 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  47.89  108.29  1.04
2.4  Seg length ending at pt. 2853 >= 6.0 stdevs above mean at 0.8245.  (no action taken)
     B1      X, Y, Z:  53.71  107.02  4.11
2.5  Seg length ending at pt. 2910 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  56.22  104.23  3.07
2.4  Seg length ending at pt. 3072 >= 6.0 stdevs above mean at 0.7548.  (no action taken)
     B1      X, Y, Z:  38.75  101.17  2.91
2.4  Seg length ending at pt. 3076 >= 6.0 stdevs above mean at 0.7718.  (no action taken)
     B1      X, Y, Z:  39.68  102.12  4.01
2.4  Seg length ending at pt. 3115 >= 6.0 stdevs above mean at 0.6936.  (no action taken)
     B1      X, Y, Z:  54.07  103.16  2.35
2.4  Seg length ending at pt. 3134 >= 6.0 stdevs above mean at 0.712.  (no action taken)
     B1      X, Y, Z:  56.74  103.73  2.43
2.5  Seg length ending at pt. 3215 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  58.95  103.69  3.2
2.5  Seg length ending at pt. 3217 <= 0.1 at 0.086.  (removed)
     A       X, Y, Z:  58.82  103.81  3.21
2.4  Seg length ending at pt. 3246 >= 6.0 stdevs above mean at 0.97.  (no action taken)
     B1      X, Y, Z:  63.0  101.67  3.51
2.4  Seg length ending at pt. 3247 >= 6.0 stdevs above mean at 0.8481.  (no action taken)
     B1      X, Y, Z:  62.94  101.77  4.35
2.4  Seg length ending at pt. 3391 >= 6.0 stdevs above mean at 0.6885.  (no action taken)
     B1      X, Y, Z:  68.13  98.59  3.23
2.4  Seg length ending at pt. 3478 >= 6.0 stdevs above mean at 0.9164.  (no action taken)
     B1      X, Y, Z:  66.02  95.15  3.07
2.4  Seg length ending at pt. 3512 >= 6.0 stdevs above mean at 0.8046.  (no action taken)
     B1      X, Y, Z:  70.53  95.08  3.77
2.4  Seg length ending at pt. 3513 >= 6.0 stdevs above mean at 0.6907.  (no action taken)
     B1      X, Y, Z:  70.53  95.11  3.08
2.4  Seg length ending at pt. 3518 >= 6.0 stdevs above mean at 0.7198.  (no action taken)
     B1      X, Y, Z:  70.67  95.28  3.93
2.4  Seg length ending at pt. 3956 >= 6.0 stdevs above mean at 0.8107.  (no action taken)
     B1      X, Y, Z:  74.77  87.05  4.91
2.4  Seg length ending at pt. 3959 >= 6.0 stdevs above mean at 0.7281.  (no action taken)
     B1      X, Y, Z:  74.24  87.48  4.78
2.4  Seg length ending at pt. 3978 >= 6.0 stdevs above mean at 0.7048.  (no action taken)
     B1      X, Y, Z:  72.79  89.83  4.09
2.4  Seg length ending at pt. 4067 >= 6.0 stdevs above mean at 0.7139.  (no action taken)
     B1      X, Y, Z:  75.93  94.06  9.46
2.5  Seg length ending at pt. 4212 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  98.48  93.39  3.76
2.5  Seg length ending at pt. 4214 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  98.47  93.56  3.8
2.4  Seg length ending at pt. 4233 >= 6.0 stdevs above mean at 0.7597.  (no action taken)
     B1      X, Y, Z:  104.89  87.17  3.24
2.4  Seg length ending at pt. 4252 >= 6.0 stdevs above mean at 0.6885.  (no action taken)
     B1      X, Y, Z:  112.93  83.02  3.95
2.4  Seg length ending at pt. 4268 >= 6.0 stdevs above mean at 0.7226.  (no action taken)
     B1      X, Y, Z:  115.48  83.35  4.86
2.5  Seg length ending at pt. 4402 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  104.71  78.5  6.8
2.1  Line 224 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  118.0  103.05  8.57
2.1  Line 780 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  117.65  83.73  6.48
2.1  Line 1127 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  76.95  93.94  6.05
2.1  Line 1176 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.98  94.71  5.58
2.1  Line 1193 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  70.46  95.13  4.57
2.1  Line 1244 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  66.03  99.92  4.32
2.1  Line 1730 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  43.92  78.85  9.66
2.1  Line 2116 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  57.07  103.64  3.14
2.1  Line 4401 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  104.77  78.46  6.74
 
 


Number of type A irregularities = 25
Number of type B1 irregularities = 31
Number of type B2 irregularities = 0
Number of type C irregularities = 0
