# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\P19_cellA_ch2_skeleton_soma_no-axon.swc.swc created with StdSwc version 1.31 on 9/6/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\P19_cellA_ch2_skeleton_soma_no-axon.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 2.  (no action taken)
     B1      X, Y, Z:  146.21  143.09  33.18
4.3  Radius of line 2 at 7.64981 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.25  143.09  33.13
4.3  Radius of line 3 at 7.70031 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.56  143.06  32.77
4.3  Radius of line 4 at 7.70031 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.72  143.04  32.6
4.5  Radius of terminal line 5 at 7.70031 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.88  143.03  32.42
4.3  Radius of line 6 at 7.64981 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.29  143.09  33.08
4.3  Radius of line 7 at 7.64981 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.38  143.08  32.99
4.5  Radius of terminal line 8 at 7.64981 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.54  143.07  32.8
4.3  Radius of line 9 at 7.53017 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.12  143.23  32.99
4.3  Radius of line 10 at 7.53017 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.07  143.29  32.89
4.5  Radius of terminal line 11 at 7.53017 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.03  143.36  32.79
4.3  Radius of line 12 at 7.51312 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.16  143.22  32.97
4.3  Radius of line 13 at 7.51499 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.08  143.41  32.65
4.3  Radius of line 14 at 7.51499 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.04  143.51  32.49
4.5  Radius of terminal line 15 at 7.51499 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.0  143.61  32.33
4.5  Radius of terminal line 16 at 7.51312 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.11  143.35  32.76
4.3  Radius of line 17 at 7.49627 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.9  143.87  31.91
4.3  Radius of line 18 at 7.45078 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.81  144.14  31.5
4.3  Radius of line 19 at 7.37516 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.73  144.43  31.09
4.3  Radius of line 20 at 7.26811 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.66  144.72  30.68
4.3  Radius of line 21 at 7.12955 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.6  145.03  30.28
4.3  Radius of line 22 at 6.96026 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.57  145.35  29.89
4.3  Radius of line 23 at 6.76198 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.55  145.68  29.51
4.3  Radius of line 24 at 6.53766 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.57  146.02  29.14
4.3  Radius of line 25 at 6.29178 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.6  146.38  28.78
4.3  Radius of line 26 at 6.03033 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.66  146.75  28.44
4.3  Radius of line 187 at 7.41134 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.16  142.61  33.05
4.3  Radius of line 188 at 7.31365 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.12  142.12  32.93
4.3  Radius of line 189 at 7.1993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.08  141.64  32.82
4.3  Radius of line 190 at 7.06298 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.04  141.15  32.73
4.3  Radius of line 191 at 6.90209 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.02  140.66  32.65
4.3  Radius of line 192 at 6.71632 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.0  140.16  32.59
4.3  Radius of line 193 at 6.50681 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.99  139.67  32.55
4.3  Radius of line 194 at 6.27518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.99  139.17  32.54
4.3  Radius of line 195 at 6.02276 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.01  138.68  32.54
4.3  Radius of line 1689 at 7.50824 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.82  143.64  32.43
4.3  Radius of line 1690 at 7.4328 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.62  143.91  32.05
4.3  Radius of line 1691 at 7.34288 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.43  144.2  31.69
4.3  Radius of line 1692 at 7.22693 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.25  144.51  31.34
4.3  Radius of line 1693 at 7.11578 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.04  144.81  31.0
4.3  Radius of line 1694 at 6.99498 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.86  145.13  30.67
4.3  Radius of line 1695 at 6.84736 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.71  145.47  30.34
4.3  Radius of line 1696 at 6.68142 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.58  145.83  30.03
4.3  Radius of line 1697 at 6.50073 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.46  146.2  29.74
4.3  Radius of line 1698 at 6.28951 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.38  146.6  29.46
4.3  Radius of line 1699 at 6.0528 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.33  147.0  29.19
4.3  Radius of line 1777 at 7.23527 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.96  143.04  32.74
4.3  Radius of line 1778 at 6.96796 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.72  142.98  32.3
4.3  Radius of line 1779 at 6.69571 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.46  142.94  31.86
4.3  Radius of line 1780 at 6.41653 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.2  142.91  31.43
4.3  Radius of line 1781 at 6.12892 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.93  142.91  31.0
4.3  Radius of line 2374 at 7.67849 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.23  143.01  32.06
4.3  Radius of line 2375 at 7.60696 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.61  143.01  31.72
4.3  Radius of line 2376 at 7.49826 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.99  143.01  31.39
4.3  Radius of line 2377 at 7.35845 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  148.38  143.03  31.07
4.3  Radius of line 2378 at 7.17499 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  148.79  143.07  30.78
4.3  Radius of line 2379 at 6.97088 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  149.21  143.13  30.52
4.3  Radius of line 2380 at 6.74055 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  149.65  143.22  30.29
4.3  Radius of line 2381 at 6.48895 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.1  143.32  30.08
4.3  Radius of line 2382 at 6.21037 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.55  143.43  29.89
4.3  Radius of line 3395 at 7.4862 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.13  143.34  32.75
4.3  Radius of line 3396 at 7.46578 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.04  143.6  32.32
4.3  Radius of line 3397 at 7.43262 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.97  143.86  31.9
4.3  Radius of line 3398 at 7.38154 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.89  144.12  31.48
4.3  Radius of line 3399 at 7.30851 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.83  144.39  31.06
4.3  Radius of line 3400 at 7.21072 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.78  144.66  30.65
4.3  Radius of line 3401 at 7.0865 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.75  144.95  30.24
4.3  Radius of line 3402 at 6.93518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.73  145.24  29.84
4.3  Radius of line 3403 at 6.75703 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.73  145.54  29.45
4.3  Radius of line 3404 at 6.55319 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.76  145.86  29.08
4.3  Radius of line 3405 at 6.32557 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.81  146.19  28.71
4.3  Radius of line 3406 at 6.07679 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.88  146.52  28.37
4.3  Radius of line 4015 at 7.54063 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.02  143.35  32.79
4.3  Radius of line 4016 at 7.56358 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.83  143.62  32.41
4.3  Radius of line 4017 at 7.55844 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.65  143.9  32.03
4.3  Radius of line 4018 at 7.52299 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.47  144.18  31.66
4.3  Radius of line 4019 at 7.46001 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.29  144.47  31.3
4.3  Radius of line 4020 at 7.37422 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.11  144.78  30.94
4.3  Radius of line 4021 at 7.26993 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.94  145.1  30.6
4.3  Radius of line 4022 at 7.14992 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.78  145.43  30.27
4.3  Radius of line 4023 at 7.01597 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.64  145.78  29.95
4.3  Radius of line 4024 at 6.86909 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.51  146.14  29.66
4.3  Radius of line 4025 at 6.70793 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.4  146.52  29.38
4.3  Radius of line 4026 at 6.52822 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.31  146.92  29.11
4.3  Radius of line 4027 at 6.32501 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.25  147.34  28.87
4.3  Radius of line 4028 at 6.09591 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.22  147.77  28.65
2.5  Seg length ending at pt. 2 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  146.25  143.09  33.13
2.4  Seg length ending at pt. 360 >= 6.0 stdevs above mean at 77.6177.  (no action taken)
     B1      X, Y, Z:  189.09  136.81  17.52
2.4  Seg length ending at pt. 998 >= 6.0 stdevs above mean at 47.2169.  (no action taken)
     B1      X, Y, Z:  193.9  141.98  36.92
2.4  Seg length ending at pt. 1201 >= 6.0 stdevs above mean at 43.1476.  (no action taken)
     B1      X, Y, Z:  221.17  114.63  8.47
2.4  Seg length ending at pt. 1622 >= 6.0 stdevs above mean at 40.66.  (no action taken)
     B1      X, Y, Z:  196.11  128.77  37.76
2.4  Seg length ending at pt. 2126 >= 6.0 stdevs above mean at 59.8921.  (no action taken)
     B1      X, Y, Z:  177.06  144.26  21.69
2.4  Seg length ending at pt. 2167 >= 6.0 stdevs above mean at 86.4919.  (no action taken)
     B1      X, Y, Z:  103.17  144.6  31.43
2.4  Seg length ending at pt. 2179 >= 6.0 stdevs above mean at 86.9306.  (no action taken)
     B1      X, Y, Z:  102.5  144.56  31.86
2.4  Seg length ending at pt. 2457 >= 6.0 stdevs above mean at 60.9999.  (no action taken)
     B1      X, Y, Z:  135.38  107.9  36.68
2.4  Seg length ending at pt. 2637 >= 6.0 stdevs above mean at 86.2726.  (no action taken)
     B1      X, Y, Z:  102.35  145.88  32.0
2.4  Seg length ending at pt. 2656 >= 6.0 stdevs above mean at 39.309.  (no action taken)
     B1      X, Y, Z:  189.06  126.72  25.85
2.5  Seg length ending at pt. 2781 <= 0.1 at 0.0648.  (removed)
     A       X, Y, Z:  183.9  129.88  24.69
2.4  Seg length ending at pt. 3323 >= 6.0 stdevs above mean at 59.6803.  (no action taken)
     B1      X, Y, Z:  128.58  154.87  7.54
2.4  Seg length ending at pt. 4079 >= 6.0 stdevs above mean at 40.9791.  (no action taken)
     B1      X, Y, Z:  174.04  144.83  24.3
2.4  Seg length ending at pt. 4118 >= 6.0 stdevs above mean at 81.4215.  (no action taken)
     B1      X, Y, Z:  104.18  143.6  31.42
2.7  Line 5 of rad 7.70031 is an included side branch.  (removed)
     A      X, Y, Z:  146.88  143.03  32.42
2.7  Line 8 of rad 7.64981 is an included side branch.  (removed)
     A      X, Y, Z:  146.54  143.07  32.8
2.7  Line 11 of rad 7.53017 is an included side branch.  (removed)
     A      X, Y, Z:  146.03  143.36  32.79
2.7  Line 15 of rad 7.51499 is an included side branch.  (removed)
     A      X, Y, Z:  146.0  143.61  32.33
2.7  Line 262 of rad 0.607355 is an included side branch.  (removed)
     A      X, Y, Z:  141.66  113.57  36.93
2.7  Line 282 of rad 0.562675 is an included side branch.  (removed)
     A      X, Y, Z:  142.3  114.31  37.07
2.7  Line 341 of rad 0.49881 is an included side branch.  (removed)
     A      X, Y, Z:  138.58  92.03  37.75
2.7  Line 746 of rad 0.33403 is an included side branch.  (removed)
     A      X, Y, Z:  125.98  52.99  31.9
2.7  Line 1296 of rad 0.421125 is an included side branch.  (removed)
     A      X, Y, Z:  177.55  96.54  28.04
2.7  Line 2010 of rad 0.54146 is an included side branch.  (removed)
     A      X, Y, Z:  126.83  135.12  7.4
2.7  Line 2166 of rad 0.421475 is an included side branch.  (removed)
     A      X, Y, Z:  187.46  144.87  11.57
2.7  Line 2182 of rad 0.385 is an included side branch.  (removed)
     A      X, Y, Z:  102.36  145.43  31.95
2.7  Line 2530 of rad 0.42698 is an included side branch.  (removed)
     A      X, Y, Z:  187.89  144.65  36.76
2.7  Line 2783 of rad 0.445315 is an included side branch.  (removed)
     A      X, Y, Z:  184.04  129.75  24.68
2.7  Line 3177 of rad 0.400315 is an included side branch.  (removed)
     A      X, Y, Z:  203.25  107.03  35.76
2.7  Line 3180 of rad 0.386475 is an included side branch.  (removed)
     A      X, Y, Z:  203.09  106.29  35.52
2.7  Line 3436 of rad 0.45881 is an included side branch.  (removed)
     A      X, Y, Z:  154.55  154.07  22.45
2.7  Line 4177 of rad 0.50096 is an included side branch.  (removed)
     A      X, Y, Z:  199.78  172.6  12.38
2.1  Line 1 has 3 daughters.  Type is 2.  (no action taken)
     B1      X, Y, Z:  146.21  143.09  33.18
2.1  Line 2780 has 3 daughters.  Type is 2.  (no action taken)
     B1      X, Y, Z:  183.85  129.92  24.7
 
 


Number of type A irregularities = 20
Number of type B1 irregularities = 101
Number of type B2 irregularities = 0
Number of type C irregularities = 0
