# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\P12_cellB_skeleton_channel2_no-axon.swc.swc created with StdSwc version 1.31 on 9/6/22.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\P12_cellB_skeleton_channel2_no-axon.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 2.  (no action taken)
     B1      X, Y, Z:  125.29  127.37  14.45
4.3  Radius of line 2 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.28  127.37  14.44
4.3  Radius of line 3 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.28  127.37  14.43
4.3  Radius of line 4 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.28  127.37  14.42
4.3  Radius of line 5 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.28  127.36  14.39
4.3  Radius of line 6 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.27  127.35  14.33
4.3  Radius of line 7 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.25  127.34  14.21
4.5  Radius of terminal line 8 at 5.3377 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.22  127.3  13.96
4.3  Radius of line 9 at 5.07676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.13  127.85  14.36
4.3  Radius of line 10 at 4.801 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.01  128.34  14.25
4.3  Radius of line 11 at 4.6528 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.96  128.85  14.18
4.3  Radius of line 12 at 4.56442 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.05  129.35  14.14
4.3  Radius of line 13 at 4.42903 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.1  129.86  14.13
4.3  Radius of line 14 at 4.31198 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.15  130.37  14.16
4.3  Radius of line 15 at 4.16755 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.23  130.86  14.24
4.3  Radius of line 16 at 4.02152 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.34  131.34  14.36
4.3  Radius of line 17 at 3.8788 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.46  131.81  14.52
4.3  Radius of line 18 at 3.73543 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.59  132.26  14.7
4.3  Radius of line 19 at 3.53215 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.72  132.72  14.89
4.3  Radius of line 776 at 5.2848 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.79  127.25  14.48
4.3  Radius of line 777 at 5.02045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.31  127.12  14.57
4.3  Radius of line 778 at 4.73975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.83  127.0  14.66
4.3  Radius of line 779 at 4.44916 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.34  126.91  14.78
4.3  Radius of line 780 at 4.12512 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  122.87  126.83  14.94
4.3  Radius of line 781 at 3.76039 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  122.42  126.76  15.15
4.3  Radius of line 782 at 3.38077 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  121.98  126.72  15.39
4.3  Radius of line 1732 at 5.12056 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.22  127.86  14.35
4.3  Radius of line 1733 at 4.87094 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.14  128.34  14.23
4.3  Radius of line 1734 at 4.69238 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.06  128.83  14.12
4.3  Radius of line 1735 at 4.54765 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.16  129.33  14.08
4.3  Radius of line 1736 at 4.4148 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.25  129.82  14.06
4.3  Radius of line 1737 at 4.27487 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.32  130.31  14.08
4.3  Radius of line 1738 at 4.10785 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.4  130.79  14.13
4.3  Radius of line 1739 at 3.94226 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.5  131.26  14.24
4.3  Radius of line 1740 at 3.79429 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.61  131.71  14.37
4.3  Radius of line 1741 at 3.67983 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.72  132.15  14.54
4.3  Radius of line 1742 at 3.53178 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.89  132.57  14.73
4.3  Radius of line 1743 at 3.39261 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.0  133.0  14.9
4.3  Radius of line 2140 at 5.27096 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.95  127.69  14.3
4.3  Radius of line 2141 at 5.04091 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.61  128.02  14.16
4.3  Radius of line 2142 at 4.80541 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.28  128.35  14.04
4.3  Radius of line 2143 at 4.55589 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.95  128.68  13.94
4.3  Radius of line 2144 at 4.28184 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.62  129.03  13.87
4.3  Radius of line 2145 at 3.97415 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.29  129.37  13.83
4.3  Radius of line 2146 at 3.62753 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  122.96  129.72  13.83
4.3  Radius of line 2788 at 5.11738 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.5  126.94  14.38
4.3  Radius of line 2789 at 4.8409 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.81  126.58  14.31
4.3  Radius of line 2790 at 4.53662 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.1  126.19  14.3
4.3  Radius of line 2791 at 4.19952 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.42  125.83  14.34
4.3  Radius of line 2792 at 3.80831 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.71  125.46  14.43
4.3  Radius of line 2793 at 3.37435 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  126.99  125.08  14.54
4.3  Radius of line 3432 at 5.11465 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.14  127.21  13.48
4.3  Radius of line 3433 at 4.85242 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.09  127.16  12.98
4.3  Radius of line 3434 at 4.57223 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.09  127.1  12.49
4.3  Radius of line 3435 at 4.27295 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.1  127.05  11.99
4.3  Radius of line 3436 at 3.85364 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.11  127.06  11.5
4.3  Radius of line 3437 at 3.42547 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.14  127.06  11.0
4.3  Radius of line 3576 at 5.07817 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.98  126.95  14.39
4.3  Radius of line 3577 at 4.69913 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.81  126.46  14.38
4.3  Radius of line 3578 at 4.48874 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.75  125.95  14.4
4.3  Radius of line 3579 at 4.31916 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.73  125.44  14.46
4.3  Radius of line 3580 at 4.11141 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.68  124.94  14.55
4.3  Radius of line 3581 at 3.89066 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.63  124.46  14.67
4.3  Radius of line 3582 at 3.68334 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.58  123.98  14.81
4.3  Radius of line 3583 at 3.41476 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  124.57  123.53  15.01
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0141.  (removed)
     A       X, Y, Z:  125.28  127.37  14.44
2.5  Seg length ending at pt. 4 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  125.28  127.37  14.42
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  125.27  127.35  14.33
2.4  Seg length ending at pt. 290 >= 6.0 stdevs above mean at 43.7138.  (no action taken)
     B1      X, Y, Z:  96.7  128.99  22.97
2.4  Seg length ending at pt. 360 >= 6.0 stdevs above mean at 63.044.  (no action taken)
     B1      X, Y, Z:  86.41  136.07  19.68
2.4  Seg length ending at pt. 850 >= 6.0 stdevs above mean at 32.8216.  (no action taken)
     B1      X, Y, Z:  130.38  124.09  30.09
2.4  Seg length ending at pt. 955 >= 6.0 stdevs above mean at 104.1524.  (no action taken)
     B1      X, Y, Z:  141.81  191.61  3.99
2.4  Seg length ending at pt. 1055 >= 6.0 stdevs above mean at 44.9483.  (no action taken)
     B1      X, Y, Z:  114.26  149.11  24.18
2.4  Seg length ending at pt. 1155 >= 6.0 stdevs above mean at 25.5545.  (no action taken)
     B1      X, Y, Z:  114.81  103.81  30.05
2.4  Seg length ending at pt. 1251 >= 6.0 stdevs above mean at 98.0652.  (no action taken)
     B1      X, Y, Z:  142.04  186.68  9.56
2.4  Seg length ending at pt. 1305 >= 6.0 stdevs above mean at 25.5912.  (no action taken)
     B1      X, Y, Z:  115.29  103.76  30.58
2.4  Seg length ending at pt. 1386 >= 6.0 stdevs above mean at 27.6974.  (no action taken)
     B1      X, Y, Z:  118.01  130.99  28.87
2.4  Seg length ending at pt. 1967 >= 6.0 stdevs above mean at 48.2608.  (no action taken)
     B1      X, Y, Z:  142.38  103.55  10.95
2.4  Seg length ending at pt. 2237 >= 6.0 stdevs above mean at 33.3305.  (no action taken)
     B1      X, Y, Z:  135.88  131.74  26.83
2.4  Seg length ending at pt. 2375 >= 6.0 stdevs above mean at 37.1362.  (no action taken)
     B1      X, Y, Z:  135.38  149.71  20.75
2.4  Seg length ending at pt. 2378 >= 6.0 stdevs above mean at 38.8145.  (no action taken)
     B1      X, Y, Z:  100.65  135.69  17.34
2.4  Seg length ending at pt. 3126 >= 6.0 stdevs above mean at 39.658.  (no action taken)
     B1      X, Y, Z:  128.71  113.85  39.37
2.5  Seg length ending at pt. 3221 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  173.96  126.99  22.27
2.4  Seg length ending at pt. 3248 >= 6.0 stdevs above mean at 32.0164.  (no action taken)
     B1      X, Y, Z:  152.79  148.81  21.61
2.4  Seg length ending at pt. 3297 >= 6.0 stdevs above mean at 32.2402.  (no action taken)
     B1      X, Y, Z:  160.26  117.49  23.25
2.4  Seg length ending at pt. 3661 >= 6.0 stdevs above mean at 28.4025.  (no action taken)
     B1      X, Y, Z:  110.87  101.92  29.51
2.4  Seg length ending at pt. 3684 >= 6.0 stdevs above mean at 28.6116.  (no action taken)
     B1      X, Y, Z:  100.68  128.09  24.04
2.4  Seg length ending at pt. 3807 >= 6.0 stdevs above mean at 96.2512.  (no action taken)
     B1      X, Y, Z:  179.76  127.45  20.95
2.4  Seg length ending at pt. 3829 >= 6.0 stdevs above mean at 95.7862.  (no action taken)
     B1      X, Y, Z:  179.24  126.95  21.23
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  125.28  127.37  14.43
2.5  Seg length ending at pt. 5 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  125.28  127.36  14.39
2.7  Line 8 of rad 5.3377 is an included side branch.  (removed)
     A      X, Y, Z:  125.22  127.3  13.96
2.7  Line 1042 of rad 0.318225 is an included side branch.  (removed)
     A      X, Y, Z:  110.8  109.61  26.08
2.7  Line 1154 of rad 0.43481 is an included side branch.  (removed)
     A      X, Y, Z:  97.47  122.4  33.46
2.7  Line 1852 of rad 0.624435 is an included side branch.  (removed)
     A      X, Y, Z:  136.45  149.72  20.91
2.7  Line 1938 of rad 0.39953 is an included side branch.  (removed)
     A      X, Y, Z:  132.82  135.63  24.32
2.7  Line 2837 of rad 0.437505 is an included side branch.  (removed)
     A      X, Y, Z:  133.38  120.97  23.0
2.7  Line 3001 of rad 0.45195 is an included side branch.  (removed)
     A      X, Y, Z:  136.54  121.22  15.67
2.7  Line 3061 of rad 0.423185 is an included side branch.  (removed)
     A      X, Y, Z:  143.36  118.13  14.18
2.7  Line 3145 of rad 0.321315 is an included side branch.  (removed)
     A      X, Y, Z:  130.27  113.68  45.94
2.7  Line 3148 of rad 0.31493 is an included side branch.  (removed)
     A      X, Y, Z:  129.63  112.99  46.05
2.7  Line 3222 of rad 0.300945 is an included side branch.  (removed)
     A      X, Y, Z:  173.97  127.07  22.31
2.7  Line 3256 of rad 0.35297 is an included side branch.  (removed)
     A      X, Y, Z:  155.21  148.84  21.57
2.7  Line 3290 of rad 0.34693 is an included side branch.  (removed)
     A      X, Y, Z:  154.23  149.03  21.5
2.7  Line 3294 of rad 0.323525 is an included side branch.  (removed)
     A      X, Y, Z:  153.31  149.37  21.48
2.7  Line 3527 of rad 0.852125 is an included side branch.  (removed)
     A      X, Y, Z:  125.51  126.92  6.9
4.4  Line 2375 of rad 0.60633 links to 2374 of rad 0.302745.  (no action taken)
     B1      X, Y, Z:  135.38  149.71  20.75
2.1  Line 1 has 7 daughters.  Type is 2.  (no action taken)
     B1      X, Y, Z:  125.29  127.37  14.45
 
 


Number of type A irregularities = 21
Number of type B1 irregularities = 87
Number of type B2 irregularities = 0
Number of type C irregularities = 0
