# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\8-10-2017-exp-slice1-LH-cells-SNc-dorsal.ims.swc.swc created with StdSwc version 1.31 on 1/31/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\8-10-2017-exp-slice1-LH-cells-SNc-dorsal.ims.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  190.13  245.52  31.0
4.3  Radius of line 2 at 6.168 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.06  245.3  29.81
4.3  Radius of line 3 at 6.315 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.57  245.49  29.46
4.3  Radius of line 4 at 6.353 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.5  245.73  29.5
4.3  Radius of line 5 at 6.321 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.32  245.89  29.51
4.3  Radius of line 6 at 6.258 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.12  246.04  29.44
4.3  Radius of line 7 at 6.331 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.04  246.28  29.31
4.3  Radius of line 8 at 6.436 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.01  246.57  29.21
4.3  Radius of line 9 at 6.521 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.94  246.85  29.2
4.3  Radius of line 10 at 6.527 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.78  247.06  29.24
4.3  Radius of line 11 at 6.471 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.57  247.21  29.26
4.3  Radius of line 12 at 6.392 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.38  247.36  29.27
4.3  Radius of line 13 at 6.293 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  188.2  247.51  29.3
4.3  Radius of line 14 at 6.158 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.99  247.62  29.32
4.3  Radius of line 15 at 5.998 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.75  247.71  29.28
4.3  Radius of line 16 at 5.848 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.51  247.82  29.23
4.3  Radius of line 17 at 5.754 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.33  247.99  29.2
4.3  Radius of line 18 at 5.742 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.23  248.22  29.23
4.3  Radius of line 19 at 5.79 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.17  248.5  29.3
4.3  Radius of line 20 at 5.836 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.11  248.8  29.35
4.3  Radius of line 21 at 5.791 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.0  249.06  29.41
4.3  Radius of line 581 at 6.227 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.04  245.06  29.41
4.3  Radius of line 582 at 5.772 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.55  245.13  29.37
2.4  Seg length ending at pt. 2 >= 6.0 stdevs above mean at 1.2122.  (no action taken)
     B1      X, Y, Z:  190.06  245.3  29.81
2.4  Seg length ending at pt. 682 >= 6.0 stdevs above mean at 1.1495.  (no action taken)
     B1      X, Y, Z:  198.42  223.38  25.95
2.4  Seg length ending at pt. 775 >= 6.0 stdevs above mean at 1.6185.  (no action taken)
     B1      X, Y, Z:  218.33  211.81  27.18
2.4  Seg length ending at pt. 850 >= 6.0 stdevs above mean at 1.1597.  (no action taken)
     B1      X, Y, Z:  204.03  231.97  27.34
2.4  Seg length ending at pt. 1324 >= 6.0 stdevs above mean at 0.8121.  (no action taken)
     B1      X, Y, Z:  220.8  218.49  26.08
2.4  Seg length ending at pt. 1374 >= 6.0 stdevs above mean at 1.6104.  (no action taken)
     B1      X, Y, Z:  223.2  208.39  24.7
2.4  Seg length ending at pt. 1375 >= 6.0 stdevs above mean at 1.6081.  (no action taken)
     B1      X, Y, Z:  221.92  209.2  25.24
2.4  Seg length ending at pt. 1376 >= 6.0 stdevs above mean at 1.6192.  (no action taken)
     B1      X, Y, Z:  220.65  210.02  25.82
2.4  Seg length ending at pt. 1377 >= 6.0 stdevs above mean at 1.618.  (no action taken)
     B1      X, Y, Z:  219.44  210.89  26.45
2.4  Seg length ending at pt. 1378 >= 6.0 stdevs above mean at 1.616.  (no action taken)
     B1      X, Y, Z:  218.33  211.81  27.18
2.4  Seg length ending at pt. 2080 >= 6.0 stdevs above mean at 0.833.  (no action taken)
     B1      X, Y, Z:  252.34  169.79  26.73
2.4  Seg length ending at pt. 2365 >= 6.0 stdevs above mean at 1.4164.  (no action taken)
     B1      X, Y, Z:  248.03  216.61  21.25
2.7  Line 2364 of rad 0.671 is an included side branch.  (removed)
     A      X, Y, Z:  246.79  216.93  21.42
2.7  Line 2425 of rad 0.758 is an included side branch.  (removed)
     A      X, Y, Z:  247.78  216.61  21.35
2.6  Line 775 and line 1378 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  218.33  211.81  27.18
4.4  Line 775 of rad 0.506 links to 774 of rad 0.25.  (no action taken)
     B1      X, Y, Z:  218.33  211.81  27.18
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 37
Number of type B2 irregularities = 0
Number of type C irregularities = 0
