# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_3_Cell2.asc.swc created with StdSwc version 1.31 on 12/19/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_3_Cell2.asc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 4 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.46  -7.91  0.0
4.2  Radius of line 5 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.5  -9.19  0.0
4.2  Radius of line 6 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.79  -10.66  0.0
4.2  Radius of line 7 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.65  -12.03  0.0
4.2  Radius of line 8 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.48  -16.76  0.0
4.2  Radius of line 9 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.65  -17.28  0.0
4.2  Radius of line 10 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.76  -20.03  0.0
4.2  Radius of line 11 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.02  -20.37  0.0
4.2  Radius of line 12 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.06  -22.94  0.0
4.2  Radius of line 13 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.06  -23.37  0.0
4.2  Radius of line 14 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.23  -25.44  0.0
4.2  Radius of line 15 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.58  -27.67  0.0
4.2  Radius of line 16 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.68  -26.39  0.0
4.2  Radius of line 17 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.18  -31.21  0.0
4.2  Radius of line 18 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.91  -31.21  0.0
4.2  Radius of line 19 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.12  -31.12  0.0
4.2  Radius of line 20 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.94  -31.12  0.0
4.2  Radius of line 21 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.66  -26.21  0.0
4.2  Radius of line 22 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.57  -24.07  0.0
4.2  Radius of line 23 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.75  -29.82  0.0
4.2  Radius of line 24 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.8  -29.92  0.0
4.2  Radius of line 25 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.51  -32.4  0.0
4.2  Radius of line 26 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.64  -34.39  0.0
4.2  Radius of line 27 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.99  -35.15  0.0
4.2  Radius of line 28 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.58  -37.47  0.0
4.2  Radius of line 29 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.58  -38.5  0.0
4.2  Radius of line 30 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.5  -41.52  0.0
4.2  Radius of line 31 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.92  -42.56  0.0
4.2  Radius of line 32 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.22  -44.02  0.0
4.2  Radius of line 33 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.33  -45.13  0.0
4.2  Radius of line 34 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.26  -45.74  0.0
4.2  Radius of line 35 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.87  -46.93  0.0
4.2  Radius of line 36 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.03  -47.63  0.0
4.2  Radius of line 37 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.55  -13.75  0.0
4.2  Radius of line 38 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.28  -18.13  0.0
4.2  Radius of line 39 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.32  -18.3  0.0
4.2  Radius of line 40 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.99  -19.6  0.0
4.2  Radius of line 41 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.24  -20.89  0.0
4.2  Radius of line 42 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.15  -21.41  0.0
4.2  Radius of line 43 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.67  -20.55  0.0
4.2  Radius of line 44 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.51  -19.26  0.0
4.2  Radius of line 45 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.82  -24.5  0.0
4.2  Radius of line 46 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.73  -13.15  0.0
4.2  Radius of line 47 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.3  2.06  0.0
4.2  Radius of line 48 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.48  2.31  0.0
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.33  5.07  0.0
4.2  Radius of line 50 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.68  8.33  0.0
4.2  Radius of line 51 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.13  10.57  0.0
4.2  Radius of line 52 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.55  11.08  0.0
4.2  Radius of line 53 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.13  8.16  0.0
4.2  Radius of line 54 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.47  8.08  0.0
4.2  Radius of line 55 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.14  7.74  0.0
4.2  Radius of line 56 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.57  7.74  0.0
4.2  Radius of line 57 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.76  7.82  0.0
4.2  Radius of line 58 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.87  10.91  0.0
4.2  Radius of line 59 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.46  6.19  0.0
4.2  Radius of line 60 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.3  4.73  0.0
4.2  Radius of line 61 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.48  4.37  0.0
4.2  Radius of line 62 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -34.65  0.52  0.0
4.2  Radius of line 63 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.17  -0.42  0.0
4.2  Radius of line 64 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.78  -1.55  0.0
4.2  Radius of line 65 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.6  -3.43  0.0
4.2  Radius of line 66 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.35  -5.07  0.0
4.2  Radius of line 67 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.6  -5.5  0.0
4.2  Radius of line 68 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -36.28  -6.19  0.0
4.2  Radius of line 69 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -36.81  -6.7  0.0
4.2  Radius of line 70 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -38.96  -10.66  0.0
4.2  Radius of line 71 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -32.85  -13.58  0.0
4.2  Radius of line 72 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.32  -13.83  0.0
4.2  Radius of line 73 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.13  13.15  0.0
4.2  Radius of line 74 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.16  13.07  0.0
4.2  Radius of line 75 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.38  17.87  0.0
4.2  Radius of line 76 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.47  17.87  0.0
4.2  Radius of line 77 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.1  21.75  0.0
4.2  Radius of line 78 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.73  26.05  0.0
4.2  Radius of line 79 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.62  30.08  0.0
4.2  Radius of line 80 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.12  35.07  0.0
4.2  Radius of line 81 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.14  35.25  0.0
4.2  Radius of line 82 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -29.67  29.82  0.0
4.2  Radius of line 83 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -28.03  24.5  0.0
4.2  Radius of line 84 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.19  20.71  0.0
4.2  Radius of line 85 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -32.25  21.32  0.0
4.2  Radius of line 86 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.27  9.02  0.0
4.2  Radius of line 87 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.04  9.19  0.0
4.2  Radius of line 88 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.67  9.53  0.0
4.2  Radius of line 89 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.75  9.63  0.0
4.2  Radius of line 90 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.85  7.74  0.0
4.2  Radius of line 91 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.28  7.3  0.0
4.2  Radius of line 92 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.21  7.21  0.0
4.2  Radius of line 93 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.74  3.87  0.0
4.2  Radius of line 94 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.41  9.36  0.0
4.2  Radius of line 95 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.5  14.86  0.0
4.2  Radius of line 96 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.26  14.78  0.0
4.2  Radius of line 97 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.45  21.32  0.0
4.2  Radius of line 98 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.45  21.48  0.0
4.2  Radius of line 99 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.14  26.64  0.0
4.2  Radius of line 100 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.58  28.53  0.0
4.2  Radius of line 101 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.12  32.92  0.0
4.2  Radius of line 102 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.2  33.17  0.0
4.2  Radius of line 103 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.82  36.36  0.0
4.2  Radius of line 104 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.6  35.25  0.0
4.2  Radius of line 105 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.31  37.82  0.0
4.2  Radius of line 106 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.6  38.6  0.0
4.2  Radius of line 107 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.6  38.68  0.05
4.2  Radius of line 108 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.35  42.72  0.05
4.2  Radius of line 109 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.71  33.53  0.0
4.2  Radius of line 110 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  20.8  32.4  0.0
4.2  Radius of line 111 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.28  28.1  0.0
4.2  Radius of line 112 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.92  44.45  0.0
4.2  Radius of line 113 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.42  46.34  0.0
4.2  Radius of line 114 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.68  46.34  0.0
4.2  Radius of line 115 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.48  51.57  0.0
4.2  Radius of line 116 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.31  49.09  0.0
4.2  Radius of line 117 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.91  50.11  0.0
4.2  Radius of line 118 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.18  -6.16  0.2
4.2  Radius of line 119 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.47  -8.31  0.2
4.2  Radius of line 120 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.56  -8.31  0.2
4.2  Radius of line 121 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.28  -10.72  0.2
4.2  Radius of line 122 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.64  -21.28  0.2
4.2  Radius of line 123 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.38  -31.01  0.2
4.2  Radius of line 124 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.87  -32.26  0.2
4.2  Radius of line 125 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.7  -32.29  0.2
4.2  Radius of line 126 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.86  -37.46  0.2
4.2  Radius of line 127 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.19  -33.59  0.2
4.2  Radius of line 128 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.06  -23.96  0.2
4.2  Radius of line 129 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.14  -23.96  0.2
4.2  Radius of line 130 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.3  -12.52  0.2
4.2  Radius of line 131 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.83  -3.58  0.14
4.2  Radius of line 132 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.83  -3.58  0.2
4.2  Radius of line 133 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.58  -4.53  0.2
4.2  Radius of line 134 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.93  -4.53  0.2
4.2  Radius of line 135 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.81  -4.44  0.2
4.2  Radius of line 136 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.62  -9.42  0.2
4.2  Radius of line 137 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.48  -12.09  0.2
4.2  Radius of line 138 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.05  -14.58  0.2
4.2  Radius of line 139 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.41  -11.32  0.2
4.2  Radius of line 140 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.35  -8.66  0.2
4.2  Radius of line 141 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -23.87  -0.66  0.2
4.2  Radius of line 142 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.12  2.77  0.2
4.2  Radius of line 143 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.12  3.2  0.2
4.2  Radius of line 144 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -30.32  3.12  0.2
4.2  Radius of line 145 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.46  -13.21  0.2
4.2  Radius of line 146 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -28.33  -11.06  0.2
4.2  Radius of line 147 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.24  -19.66  0.14
4.2  Radius of line 148 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.24  -19.66  0.2
4.2  Radius of line 149 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.1  -22.14  0.2
4.2  Radius of line 150 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.81  -22.76  0.14
4.2  Radius of line 151 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.92  -27.48  0.2
4.2  Radius of line 152 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -30.66  -28.0  0.2
4.2  Radius of line 153 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -27.3  -32.38  0.2
4.2  Radius of line 154 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.01  -35.64  0.2
4.2  Radius of line 155 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.35  -40.97  0.2
4.2  Radius of line 156 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -22.75  -35.82  0.14
4.2  Radius of line 157 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.53  -31.69  0.2
2.5  Seg length ending at pt. 76 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -12.47  17.87  0.0
2.5  Seg length ending at pt. 107 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  19.6  38.68  0.05
2.5  Seg length ending at pt. 120 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  3.56  -8.31  0.2
2.5  Seg length ending at pt. 129 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  14.14  -23.96  0.2
2.5  Seg length ending at pt. 132 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  -6.83  -3.58  0.2
2.5  Seg length ending at pt. 148 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  -33.24  -19.66  0.2
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  -1.84  -1.48  0.0
 
 


Number of type A irregularities = 6
Number of type B1 irregularities = 155
Number of type B2 irregularities = 0
Number of type C irregularities = 0
