# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_3_Cell1.asc.swc created with StdSwc version 1.31 on 12/19/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_3_Cell1.asc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 4 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.43  11.05  0.0
4.2  Radius of line 5 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.52  11.05  0.0
4.2  Radius of line 6 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.5  11.23  0.0
4.2  Radius of line 7 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.71  9.99  0.0
4.2  Radius of line 8 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.89  9.93  0.0
4.2  Radius of line 9 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.44  9.08  0.0
4.2  Radius of line 10 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.05  8.03  0.0
4.2  Radius of line 11 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.26  6.66  0.0
4.2  Radius of line 12 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.41  2.89  0.0
4.2  Radius of line 13 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.26  -1.14  0.0
4.2  Radius of line 14 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  21.67  -3.12  0.0
4.2  Radius of line 15 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  22.44  -8.38  0.0
4.2  Radius of line 16 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  26.05  -4.67  0.0
4.2  Radius of line 17 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.99  4.42  0.0
4.2  Radius of line 18 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.73  4.17  0.0
4.2  Radius of line 19 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.69  0.05  0.0
4.2  Radius of line 20 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.9  -9.24  0.0
4.2  Radius of line 21 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.99  -9.24  0.0
4.2  Radius of line 22 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.75  -9.24  0.0
4.2  Radius of line 23 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.14  -12.92  0.0
4.2  Radius of line 24 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.4  -16.55  0.0
4.2  Radius of line 25 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.33  -16.71  0.0
4.2  Radius of line 26 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.91  -22.55  0.0
4.2  Radius of line 27 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.9  -22.73  0.0
4.2  Radius of line 28 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.25  -25.39  0.0
4.2  Radius of line 29 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.5  -28.41  0.0
4.2  Radius of line 30 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.98  -27.03  0.0
4.2  Radius of line 31 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.91  -20.92  0.0
4.2  Radius of line 32 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.3  -14.39  0.0
4.2  Radius of line 33 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.75  -14.82  0.0
4.2  Radius of line 34 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.83  -14.82  0.0
4.2  Radius of line 35 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.92  -10.34  0.0
4.2  Radius of line 36 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.71  -5.87  0.0
4.2  Radius of line 37 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.71  -5.79  0.0
4.2  Radius of line 38 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.83  -2.52  0.0
4.2  Radius of line 39 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.4  14.15  0.0
4.2  Radius of line 40 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.37  14.83  0.0
4.2  Radius of line 41 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  21.42  12.93  0.0
4.2  Radius of line 42 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.13  10.5  0.0
4.2  Radius of line 43 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.01  10.36  0.0
4.2  Radius of line 44 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  27.26  8.99  0.0
4.2  Radius of line 45 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  27.51  8.56  0.0
4.2  Radius of line 46 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  29.58  6.83  0.0
4.2  Radius of line 47 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.17  7.44  0.0
4.2  Radius of line 48 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.25  7.44  0.0
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  38.45  7.95  0.0
4.2  Radius of line 50 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  40.85  7.0  0.0
4.2  Radius of line 51 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  41.46  13.8  0.0
4.2  Radius of line 52 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.0  3.39  0.0
4.2  Radius of line 53 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  26.05  16.21  0.0
4.2  Radius of line 54 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.87  22.23  0.0
4.2  Radius of line 55 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.04  7.17  0.34
4.2  Radius of line 56 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.01  6.15  0.34
4.2  Radius of line 57 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.3  3.92  1.11
4.2  Radius of line 58 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.14  3.83  1.14
4.2  Radius of line 59 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.59  -0.04  1.14
4.2  Radius of line 60 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.51  -0.64  1.14
4.2  Radius of line 61 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.68  -3.29  1.14
4.2  Radius of line 62 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.5  -3.64  1.14
4.2  Radius of line 63 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.33  -6.57  1.14
4.2  Radius of line 64 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.27  -0.04  1.14
4.2  Radius of line 65 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.93  0.91  0.34
4.2  Radius of line 66 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.72  -0.2  0.34
4.2  Radius of line 67 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.5  -2.18  0.34
4.2  Radius of line 68 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.09  -3.99  0.34
4.2  Radius of line 69 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.0  -3.99  0.34
4.2  Radius of line 70 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.86  -8.46  0.34
4.2  Radius of line 71 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.0  -10.86  0.34
4.2  Radius of line 72 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.75  -11.38  0.34
4.2  Radius of line 73 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.55  -15.67  0.34
4.2  Radius of line 74 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.21  -16.37  0.34
4.2  Radius of line 75 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.97  -18.85  0.34
4.2  Radius of line 76 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.89  -18.94  0.34
4.2  Radius of line 77 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.71  -19.21  0.34
4.2  Radius of line 78 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.84  -20.76  0.34
4.2  Radius of line 79 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.23  -24.01  0.34
4.2  Radius of line 80 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.37  -23.32  0.34
4.2  Radius of line 81 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.66  -3.64  0.34
4.2  Radius of line 82 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.46  8.9  0.34
4.2  Radius of line 83 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.46  8.99  0.34
4.2  Radius of line 84 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.24  6.24  0.34
4.2  Radius of line 85 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.26  3.06  0.34
4.2  Radius of line 86 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.87  5.63  0.34
4.2  Radius of line 87 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.4  13.11  0.34
4.2  Radius of line 88 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.17  13.72  0.34
4.2  Radius of line 89 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.17  14.49  0.34
4.2  Radius of line 90 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.25  16.73  0.34
4.2  Radius of line 91 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.71  18.69  0.34
4.2  Radius of line 92 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.54  19.21  0.34
4.2  Radius of line 93 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.19  19.82  0.34
4.2  Radius of line 94 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.75  22.39  0.34
4.2  Radius of line 95 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.83  18.69  0.34
4.2  Radius of line 96 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.39  17.32  0.34
4.2  Radius of line 97 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.67  17.07  0.34
4.2  Radius of line 98 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -32.5  13.02  0.34
4.2  Radius of line 99 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.32  8.99  0.34
4.2  Radius of line 100 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.5  8.9  0.34
4.2  Radius of line 101 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.96  2.79  0.34
4.2  Radius of line 102 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.92  16.89  0.34
4.2  Radius of line 103 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -39.13  20.25  0.34
4.2  Radius of line 104 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -36.89  26.44  0.34
4.2  Radius of line 105 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -34.64  28.67  0.34
4.2  Radius of line 106 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -32.25  32.36  0.34
4.2  Radius of line 107 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -38.43  33.57  0.34
4.2  Radius of line 108 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -42.64  18.78  0.34
4.2  Radius of line 109 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.85  14.23  0.34
4.2  Radius of line 110 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.28  26.01  0.34
4.2  Radius of line 111 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.8  29.71  0.34
4.2  Radius of line 112 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.37  33.84  0.34
4.2  Radius of line 113 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.37  39.6  0.34
4.2  Radius of line 114 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.85  40.1  0.34
4.2  Radius of line 115 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -23.64  41.06  0.34
4.2  Radius of line 116 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.98  35.13  0.34
4.2  Radius of line 117 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.75  24.03  0.34
4.2  Radius of line 118 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.33  28.94  0.34
4.2  Radius of line 119 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.13  31.51  0.34
4.2  Radius of line 120 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.4  31.94  0.34
4.2  Radius of line 121 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.59  33.92  0.34
4.2  Radius of line 122 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.84  33.65  0.34
4.2  Radius of line 123 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.02  40.03  0.34
4.2  Radius of line 124 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.62  29.62  0.34
2.5  Seg length ending at pt. 5 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  11.52  11.05  0.0
2.5  Seg length ending at pt. 21 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  12.99  -9.24  0.0
2.5  Seg length ending at pt. 34 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  18.83  -14.82  0.0
2.5  Seg length ending at pt. 37 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  17.71  -5.79  0.0
2.5  Seg length ending at pt. 48 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  35.25  7.44  0.0
2.5  Seg length ending at pt. 69 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -14.0  -3.99  0.34
2.5  Seg length ending at pt. 83 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -9.46  8.99  0.34
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  3.01  9.69  0.0
 
 


Number of type A irregularities = 7
Number of type B1 irregularities = 122
Number of type B2 irregularities = 0
Number of type C irregularities = 0
