# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_2_Cell3.asc.swc created with StdSwc version 1.31 on 12/19/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_2_Cell3.asc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 4 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.35  -4.73  0.0
4.2  Radius of line 5 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.31  -5.5  0.0
4.2  Radius of line 6 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.24  -5.5  0.0
4.2  Radius of line 7 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.85  -5.41  0.0
4.2  Radius of line 8 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.59  -5.75  0.0
4.2  Radius of line 9 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.52  -5.75  0.0
4.2  Radius of line 10 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.34  -6.87  0.0
4.2  Radius of line 11 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.34  -7.04  0.0
4.2  Radius of line 12 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.59  -7.38  0.0
4.2  Radius of line 13 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.06  -8.67  0.0
4.2  Radius of line 14 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.27  -9.19  0.0
4.2  Radius of line 15 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.36  4.46  0.14
4.2  Radius of line 16 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.5  6.01  0.14
4.2  Radius of line 17 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.55  5.1  1.1
4.2  Radius of line 18 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.73  5.07  1.14
4.2  Radius of line 19 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.81  1.97  1.14
4.2  Radius of line 20 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.8  3.35  1.14
4.2  Radius of line 21 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.52  -1.29  1.14
4.2  Radius of line 22 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.5  -5.58  1.14
4.2  Radius of line 23 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.53  -4.55  1.14
4.2  Radius of line 24 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.35  -8.08  1.14
4.2  Radius of line 25 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  25.19  -1.29  1.14
4.2  Radius of line 26 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  26.92  1.12  1.14
4.2  Radius of line 27 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.17  -1.47  1.14
4.2  Radius of line 28 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.34  -1.55  1.14
4.2  Radius of line 29 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  27.69  3.95  1.14
4.2  Radius of line 30 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  27.17  8.5  1.14
4.2  Radius of line 31 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.5  7.91  1.14
4.2  Radius of line 32 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.34  13.5  1.14
4.2  Radius of line 33 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.64  3.08  1.14
4.2  Radius of line 34 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.58  9.8  0.1
4.2  Radius of line 35 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.51  13.15  0.1
4.2  Radius of line 36 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.93  15.99  0.1
4.2  Radius of line 37 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.06  18.91  0.1
4.2  Radius of line 38 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.92  15.65  0.1
4.2  Radius of line 39 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.73  18.05  0.1
4.2  Radius of line 40 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  16.46  14.98  0.1
4.2  Radius of line 41 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  16.6  14.86  0.1
4.2  Radius of line 42 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.28  20.98  0.1
4.2  Radius of line 43 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.73  24.23  0.1
4.2  Radius of line 44 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.27  28.71  0.1
4.2  Radius of line 45 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.27  28.8  0.1
4.2  Radius of line 46 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.44  30.85  0.1
4.2  Radius of line 47 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.71  30.0  0.1
4.2  Radius of line 48 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.6  31.03  0.1
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.37  25.44  0.1
4.2  Radius of line 50 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.5  7.38  0.2
4.2  Radius of line 51 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.52  9.36  0.14
4.2  Radius of line 52 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.95  9.71  0.14
4.2  Radius of line 53 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.96  12.64  0.14
4.2  Radius of line 54 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.9  15.65  0.14
4.2  Radius of line 55 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.9  15.9  0.14
4.2  Radius of line 56 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.66  20.03  0.14
4.2  Radius of line 57 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.97  19.69  0.14
4.2  Radius of line 58 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.41  23.73  0.14
4.2  Radius of line 59 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.66  24.04  0.14
4.2  Radius of line 60 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.49  24.07  0.14
4.2  Radius of line 61 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.04  25.53  0.14
4.2  Radius of line 62 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.98  28.03  0.14
4.2  Radius of line 63 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.79  31.37  0.14
4.2  Radius of line 64 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.85  22.87  0.1
4.2  Radius of line 65 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -8.85  22.94  0.1
4.2  Radius of line 66 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.33  14.18  0.2
4.2  Radius of line 67 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.41  14.18  0.2
4.2  Radius of line 68 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.53  16.67  0.2
4.2  Radius of line 69 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.89  15.9  0.2
4.2  Radius of line 70 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -27.26  16.85  0.2
4.2  Radius of line 71 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.39  21.05  0.25
4.2  Radius of line 72 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -34.39  13.83  0.14
4.2  Radius of line 73 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -34.39  13.92  0.14
4.2  Radius of line 74 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.68  15.81  0.19
4.2  Radius of line 75 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.84  15.9  0.2
4.2  Radius of line 76 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -38.6  17.8  0.2
4.2  Radius of line 77 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -38.96  22.26  -0.65
4.2  Radius of line 78 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.42  22.87  0.2
4.2  Radius of line 79 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -36.11  24.16  0.25
4.2  Radius of line 80 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -44.38  25.96  0.25
4.2  Radius of line 81 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -43.6  12.21  0.1
4.2  Radius of line 82 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -43.6  12.21  0.14
4.2  Radius of line 83 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.42  7.29  0.1
4.2  Radius of line 84 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -40.32  7.13  0.1
4.2  Radius of line 85 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -49.78  15.13  0.14
4.2  Radius of line 86 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -52.63  21.05  0.14
4.2  Radius of line 87 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -57.1  22.69  0.14
4.2  Radius of line 88 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -53.14  26.64  0.14
4.2  Radius of line 89 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -48.74  29.22  0.14
4.2  Radius of line 90 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -48.59  29.32  0.14
4.2  Radius of line 91 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -56.24  29.92  0.14
4.2  Radius of line 92 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -52.54  31.21  0.14
4.2  Radius of line 93 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -47.39  8.67  -0.2
4.2  Radius of line 94 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -32.25  13.58  0.14
4.2  Radius of line 95 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.91  11.68  0.14
4.2  Radius of line 96 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.82  11.68  0.14
4.2  Radius of line 97 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -29.14  11.77  0.14
4.2  Radius of line 98 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -23.91  8.76  0.2
4.2  Radius of line 99 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.66  7.04  0.2
4.2  Radius of line 100 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -30.62  7.04  0.2
4.2  Radius of line 101 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.82  2.41  0.2
4.2  Radius of line 102 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.82  2.41  0.25
4.2  Radius of line 103 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.19  -0.42  -1.5
4.2  Radius of line 104 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.39  -6.19  -1.5
4.2  Radius of line 105 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -26.32  -6.79  -1.55
4.2  Radius of line 106 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.96  -9.89  -1.5
4.2  Radius of line 107 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.43  5.84  0.2
4.2  Radius of line 108 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.52  5.84  0.2
4.2  Radius of line 109 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.04  5.92  0.14
4.2  Radius of line 110 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.96  0.42  0.14
4.2  Radius of line 111 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.88  8.5  0.14
4.2  Radius of line 112 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.25  10.14  0.2
4.2  Radius of line 113 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.76  -5.04  0.1
4.2  Radius of line 114 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.76  -6.25  0.1
4.2  Radius of line 115 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.16  -11.41  0.1
4.2  Radius of line 116 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.66  -12.52  0.1
4.2  Radius of line 117 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.55  -18.96  0.1
4.2  Radius of line 118 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.5  -16.91  0.1
4.2  Radius of line 119 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.4  -22.32  0.1
4.2  Radius of line 120 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.34  -22.67  0.1
4.2  Radius of line 121 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.76  -28.42  0.1
4.2  Radius of line 122 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.08  -22.99  0.1
4.2  Radius of line 123 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.25  -22.92  0.1
4.2  Radius of line 124 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.25  -22.83  0.1
4.2  Radius of line 125 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.29  -26.44  0.1
4.2  Radius of line 126 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.31  -17.17  0.1
4.2  Radius of line 127 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.34  -31.94  0.1
4.2  Radius of line 128 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  16.71  -33.67  0.1
4.2  Radius of line 129 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  20.16  -32.46  0.1
4.2  Radius of line 130 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  20.16  -32.38  0.1
4.2  Radius of line 131 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  25.05  -27.3  0.1
4.2  Radius of line 132 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  22.05  -17.07  0.1
4.2  Radius of line 133 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  26.1  -19.92  0.1
4.2  Radius of line 134 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  27.39  -15.44  0.1
4.2  Radius of line 135 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  31.85  -12.77  0.1
4.2  Radius of line 136 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.21  -15.18  0.1
4.2  Radius of line 137 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.29  -15.18  0.1
4.2  Radius of line 138 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.09  -7.7  0.1
4.2  Radius of line 139 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  37.78  -5.38  0.1
4.2  Radius of line 140 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  33.06  -0.92  0.1
4.2  Radius of line 141 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  31.76  -22.92  0.1
4.2  Radius of line 142 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.46  -29.62  0.1
4.2  Radius of line 143 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.52  -32.03  0.1
4.2  Radius of line 144 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.86  -32.03  0.1
4.2  Radius of line 145 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  37.35  -34.61  0.1
4.2  Radius of line 146 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  36.75  -40.89  0.1
4.2  Radius of line 147 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  42.68  -33.67  0.1
4.2  Radius of line 148 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.09  -18.96  0.1
2.5  Seg length ending at pt. 6 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  2.24  -5.5  0.0
2.5  Seg length ending at pt. 9 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  0.52  -5.75  0.0
2.5  Seg length ending at pt. 45 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  14.27  28.8  0.1
2.5  Seg length ending at pt. 65 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  -8.85  22.94  0.1
2.5  Seg length ending at pt. 67 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -13.41  14.18  0.2
2.5  Seg length ending at pt. 73 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -34.39  13.92  0.14
2.5  Seg length ending at pt. 82 <= 0.1 at 0.04.  (removed)
     A       X, Y, Z:  -43.6  12.21  0.14
2.5  Seg length ending at pt. 96 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -31.82  11.68  0.14
2.5  Seg length ending at pt. 102 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  -26.82  2.41  0.25
2.5  Seg length ending at pt. 108 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -3.52  5.84  0.2
2.5  Seg length ending at pt. 124 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -1.25  -22.83  0.1
2.5  Seg length ending at pt. 130 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  20.16  -32.38  0.1
2.5  Seg length ending at pt. 137 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  35.29  -15.18  0.1
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  0.92  2.31  0.0
 
 


Number of type A irregularities = 13
Number of type B1 irregularities = 146
Number of type B2 irregularities = 0
Number of type C irregularities = 0
