# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_2_Cell2.asc.swc created with StdSwc version 1.31 on 12/19/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Veh_3_Sec_2_Cell2.asc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 4 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  20.89  -5.24  0.0
4.2  Radius of line 5 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  22.87  -6.28  0.0
4.2  Radius of line 6 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.55  -6.87  0.0
4.2  Radius of line 7 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.72  -9.19  0.0
4.2  Radius of line 8 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.73  -9.36  0.0
4.2  Radius of line 9 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.64  -9.36  0.0
4.2  Radius of line 10 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.94  -9.46  0.0
4.2  Radius of line 11 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  25.37  -11.17  0.0
4.2  Radius of line 12 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  24.63  -14.61  0.0
4.2  Radius of line 13 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  24.6  -14.78  0.0
4.2  Radius of line 14 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  29.5  -12.64  0.0
4.2  Radius of line 15 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  29.92  -10.75  0.0
4.2  Radius of line 16 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  29.92  -10.66  0.0
4.2  Radius of line 17 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  30.5  -6.79  0.0
4.2  Radius of line 18 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  30.53  -6.62  0.0
4.2  Radius of line 19 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  30.53  -6.62  0.05
4.2  Radius of line 20 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.93  -5.75  0.0
4.2  Radius of line 21 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  32.93  -5.75  0.05
4.2  Radius of line 22 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  26.23  -4.63  0.0
4.2  Radius of line 23 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.14  -13.24  0.05
4.2  Radius of line 24 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.14  -13.15  0.05
4.2  Radius of line 25 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  36.97  -11.17  0.05
4.2  Radius of line 26 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.31  -15.39  0.05
4.2  Radius of line 27 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  37.49  -16.45  0.05
4.2  Radius of line 28 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  37.67  -16.51  0.05
4.2  Radius of line 29 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  33.28  -18.66  0.05
4.2  Radius of line 30 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  29.41  -15.9  0.05
4.2  Radius of line 31 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  33.28  -8.93  -0.05
4.2  Radius of line 32 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  34.92  -8.0  -0.05
4.2  Radius of line 33 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  39.22  -9.64  -0.05
4.2  Radius of line 34 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  39.39  -9.71  -0.05
4.2  Radius of line 35 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  38.6  -3.77  -0.05
4.2  Radius of line 36 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  40.07  -3.27  -0.05
4.2  Radius of line 37 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  43.09  -4.99  -0.05
4.2  Radius of line 38 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  40.42  -0.94  -0.05
4.2  Radius of line 39 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  35.17  -2.91  -0.05
4.2  Radius of line 40 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  24.67  -3.7  0.05
4.2  Radius of line 41 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.48  -2.91  -0.05
4.2  Radius of line 42 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.48  -2.91  0.0
4.2  Radius of line 43 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.06  3.27  0.0
4.2  Radius of line 44 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.87  3.95  0.0
4.2  Radius of line 45 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.91  6.81  0.04
4.2  Radius of line 46 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.81  6.95  0.05
4.2  Radius of line 47 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.27  13.33  0.05
4.2  Radius of line 48 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.73  19.51  0.0
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.11  17.76  0.0
4.2  Radius of line 50 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.29  17.71  0.0
4.2  Radius of line 51 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.19  24.32  -0.05
4.2  Radius of line 52 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.19  24.32  0.0
4.2  Radius of line 53 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.57  20.03  -0.05
4.2  Radius of line 54 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.57  20.03  0.0
4.2  Radius of line 55 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.99  2.66  -0.05
4.2  Radius of line 56 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.99  2.66  0.0
4.2  Radius of line 57 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.67  0.65  0.0
4.2  Radius of line 58 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.79  0.52  0.0
4.2  Radius of line 59 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.94  -0.17  0.0
4.2  Radius of line 60 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.75  7.82  0.0
4.2  Radius of line 61 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.89  4.73  0.0
4.2  Radius of line 62 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.89  4.8  0.0
4.2  Radius of line 63 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.7  8.86  0.0
4.2  Radius of line 64 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.77  9.02  0.0
4.2  Radius of line 65 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.77  9.1  0.0
4.2  Radius of line 66 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.05  16.67  0.0
4.2  Radius of line 67 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.05  16.85  0.0
4.2  Radius of line 68 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.84  22.87  0.0
4.2  Radius of line 69 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.05  25.62  0.0
4.2  Radius of line 70 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.51  24.42  -0.05
4.2  Radius of line 71 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.96  2.14  0.0
4.2  Radius of line 72 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.94  3.27  0.0
4.2  Radius of line 73 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.16  1.19  0.0
4.2  Radius of line 74 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.71  2.91  0.0
4.2  Radius of line 75 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -28.37  2.66  0.0
4.2  Radius of line 76 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.33  6.36  0.0
4.2  Radius of line 77 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.39  9.27  0.0
4.2  Radius of line 78 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.96  13.15  0.0
4.2  Radius of line 79 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.25  8.25  0.0
4.2  Radius of line 80 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.2  8.85  0.0
4.2  Radius of line 81 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.06  -5.5  0.0
4.2  Radius of line 82 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.68  -7.57  0.0
4.2  Radius of line 83 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.76  -10.06  0.0
4.2  Radius of line 84 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.85  -10.4  0.0
4.2  Radius of line 85 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.11  -12.64  0.0
4.2  Radius of line 86 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.49  -1.45  -0.25
4.2  Radius of line 87 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  2.41  -2.06  -0.25
4.2  Radius of line 88 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.97  -5.16  -0.25
4.2  Radius of line 89 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.71  -5.84  -0.25
4.2  Radius of line 90 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.29  -7.57  -0.25
4.2  Radius of line 91 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.63  -9.89  -0.25
4.2  Radius of line 92 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.99  -9.89  -0.25
4.2  Radius of line 93 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.17  -14.18  -0.25
4.2  Radius of line 94 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.34  -18.91  -0.25
4.2  Radius of line 95 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.92  -19.89  -0.25
4.2  Radius of line 96 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.1  -19.94  -0.25
4.2  Radius of line 97 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.6  -17.87  -0.25
4.2  Radius of line 98 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.6  -22.6  -0.25
4.2  Radius of line 99 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  3.6  -22.51  -0.25
4.2  Radius of line 100 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.73  4.83  0.1
4.2  Radius of line 101 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  8.16  5.36  0.1
4.2  Radius of line 102 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.22  8.1  0.1
4.2  Radius of line 103 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.31  8.18  0.1
4.2  Radius of line 104 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.25  11.11  0.1
4.2  Radius of line 105 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.25  11.19  0.1
4.2  Radius of line 106 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  12.92  9.69  0.1
4.2  Radius of line 107 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.06  9.57  0.1
4.2  Radius of line 108 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.35  8.01  0.1
4.2  Radius of line 109 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.55  4.07  0.1
4.2  Radius of line 110 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  23.98  9.4  0.1
4.2  Radius of line 111 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.4  12.91  0.1
4.2  Radius of line 112 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.77  13.0  0.1
4.2  Radius of line 113 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  22.17  12.06  0.1
4.2  Radius of line 114 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.55  15.83  0.1
2.5  Seg length ending at pt. 9 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  23.64  -9.36  0.0
2.5  Seg length ending at pt. 16 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  29.92  -10.66  0.0
2.5  Seg length ending at pt. 19 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  30.53  -6.62  0.05
2.5  Seg length ending at pt. 21 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  32.93  -5.75  0.05
2.5  Seg length ending at pt. 24 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  34.14  -13.15  0.05
2.5  Seg length ending at pt. 42 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  23.48  -2.91  0.0
2.5  Seg length ending at pt. 52 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  -6.19  24.32  0.0
2.5  Seg length ending at pt. 54 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  -7.57  20.03  0.0
2.5  Seg length ending at pt. 56 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  -4.99  2.66  0.0
2.5  Seg length ending at pt. 62 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  -9.89  4.8  0.0
2.5  Seg length ending at pt. 65 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -11.77  9.1  0.0
2.5  Seg length ending at pt. 99 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  3.6  -22.51  -0.25
2.5  Seg length ending at pt. 105 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  11.25  11.19  0.1
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  7.76  -0.53  0.0
 
 


Number of type A irregularities = 13
Number of type B1 irregularities = 112
Number of type B2 irregularities = 0
Number of type C irregularities = 0
