# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Naive_4_Sec_1_Cell3.asc.swc created with StdSwc version 1.31 on 12/19/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\LPS_microglia_Naive_4_Sec_1_Cell3.asc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.2  Radius of line 4 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -5.44  -10.86  0.05
4.2  Radius of line 5 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.97  -13.96  0.05
4.2  Radius of line 6 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.83  -15.59  0.0
4.2  Radius of line 7 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.73  -15.76  0.05
4.2  Radius of line 8 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.93  -18.51  0.0
4.2  Radius of line 9 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.28  -21.44  0.0
4.2  Radius of line 10 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.19  -21.44  0.0
4.2  Radius of line 11 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -0.7  -22.98  0.0
4.2  Radius of line 12 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.57  -25.14  -0.05
4.2  Radius of line 13 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -2.25  -26.33  -0.05
4.2  Radius of line 14 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -3.62  -23.85  -0.05
4.2  Radius of line 15 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  0.32  -27.03  -0.05
4.2  Radius of line 16 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.95  -26.76  0.0
4.2  Radius of line 17 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  1.01  -28.92  0.0
4.2  Radius of line 18 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.57  -32.53  0.05
4.2  Radius of line 19 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.23  -35.71  0.05
4.2  Radius of line 20 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.28  -25.91  -1.39
4.2  Radius of line 21 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.01  -16.62  0.0
4.2  Radius of line 22 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.83  -15.42  0.0
4.2  Radius of line 23 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.8  -13.11  0.0
4.2  Radius of line 24 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.96  -13.01  0.0
4.2  Radius of line 25 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.99  -9.06  0.0
4.2  Radius of line 26 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.84  -8.19  0.0
4.2  Radius of line 27 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.57  -4.58  0.0
4.2  Radius of line 28 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.8  -3.39  0.0
4.2  Radius of line 29 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.77  -0.19  0.0
4.2  Radius of line 30 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.87  -0.04  0.0
4.2  Radius of line 31 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.98  -3.22  0.0
4.2  Radius of line 32 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  21.57  -6.74  0.0
4.2  Radius of line 33 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  18.8  -0.46  0.0
4.2  Radius of line 34 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.19  0.91  0.0
4.2  Radius of line 35 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.41  -2.52  0.0
4.2  Radius of line 36 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  16.23  -11.47  0.0
4.2  Radius of line 37 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.81  -17.14  0.0
4.2  Radius of line 38 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.76  -17.32  0.0
4.2  Radius of line 39 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  19.58  -17.23  0.0
4.2  Radius of line 40 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  22.42  -12.5  0.0
4.2  Radius of line 41 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.26  -18.94  0.0
4.2  Radius of line 42 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.51  -12.92  0.0
4.2  Radius of line 43 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.51  -12.92  -0.05
4.2  Radius of line 44 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.19  -15.25  0.05
4.2  Radius of line 45 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -1.83  -9.91  0.05
4.2  Radius of line 46 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.23  -14.39  0.1
4.2  Radius of line 47 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.93  -17.82  0.1
4.2  Radius of line 48 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.16  -22.21  0.1
4.2  Radius of line 49 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.58  -27.03  0.14
4.2  Radius of line 50 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.03  -32.53  0.14
4.2  Radius of line 51 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.1  -35.03  0.14
4.2  Radius of line 52 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.76  -38.71  0.14
4.2  Radius of line 53 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.03  -40.35  0.14
4.2  Radius of line 54 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.1  -40.78  0.14
4.2  Radius of line 55 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.39  -44.47  0.14
4.2  Radius of line 56 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.39  -44.82  0.14
4.2  Radius of line 57 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.69  -47.4  0.14
4.2  Radius of line 58 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -22.28  -48.27  0.14
4.2  Radius of line 59 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -24.44  -51.35  0.14
4.2  Radius of line 60 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.3  -51.78  0.14
4.2  Radius of line 61 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -28.57  -53.67  0.14
4.2  Radius of line 62 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -30.12  -54.28  0.14
4.2  Radius of line 63 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.83  -54.28  0.14
4.2  Radius of line 64 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.03  -53.17  0.14
4.2  Radius of line 65 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -33.13  -53.07  0.14
4.2  Radius of line 66 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -34.15  -48.27  0.14
4.2  Radius of line 67 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.02  -45.85  0.14
4.2  Radius of line 68 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.1  -45.85  0.14
4.2  Radius of line 69 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -35.71  -40.0  0.14
4.2  Radius of line 70 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -37.17  -36.22  0.14
4.2  Radius of line 71 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.92  -38.97  0.14
4.2  Radius of line 72 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -31.5  -45.0  0.14
4.2  Radius of line 73 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -22.28  -39.4  0.14
4.2  Radius of line 74 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.58  -27.98  0.14
4.2  Radius of line 75 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.3  -31.42  0.14
4.2  Radius of line 76 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.3  -31.5  0.14
4.2  Radius of line 77 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.42  -34.42  0.14
4.2  Radius of line 78 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.76  -34.77  0.14
4.2  Radius of line 79 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -20.66  -37.17  0.14
4.2  Radius of line 80 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.85  -37.85  0.14
4.2  Radius of line 81 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.07  -26.17  0.1
4.2  Radius of line 82 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.33  -27.19  0.1
4.2  Radius of line 83 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.14  -29.01  0.1
4.2  Radius of line 84 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.59  -31.16  0.1
4.2  Radius of line 85 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.42  -31.92  0.1
4.2  Radius of line 86 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.85  -35.28  0.1
4.2  Radius of line 87 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.11  -38.21  0.1
4.2  Radius of line 88 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.07  -40.0  0.1
4.2  Radius of line 89 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.05  -38.81  0.05
4.2  Radius of line 90 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.24  -45.77  0.1
4.2  Radius of line 91 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.5  -47.49  0.1
4.2  Radius of line 92 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.41  -47.49  0.1
4.2  Radius of line 93 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.4  -48.95  0.1
4.2  Radius of line 94 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -12.32  -48.95  0.1
4.2  Radius of line 95 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -6.73  -29.6  0.1
4.2  Radius of line 96 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -4.83  -26.17  0.1
4.2  Radius of line 97 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -7.84  -18.35  0.1
4.2  Radius of line 98 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -9.74  -7.0  0.1
4.2  Radius of line 99 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.16  -6.83  0.1
4.2  Radius of line 100 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.19  -5.54  0.1
4.2  Radius of line 101 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -13.08  -2.35  0.1
4.2  Radius of line 102 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.16  0.91  0.1
4.2  Radius of line 103 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.33  5.71  0.1
4.2  Radius of line 104 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -18.76  3.31  0.1
4.2  Radius of line 105 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -11.02  1.34  0.1
4.2  Radius of line 106 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -10.08  3.39  0.1
4.2  Radius of line 107 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.66  -13.27  0.1
4.2  Radius of line 108 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -15.66  -13.18  0.1
4.2  Radius of line 109 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -16.69  -11.9  0.1
4.2  Radius of line 110 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.71  -11.56  0.1
4.2  Radius of line 111 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -22.36  -15.28  0.1
4.2  Radius of line 112 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -22.46  -15.42  0.1
4.2  Radius of line 113 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -23.23  -11.56  0.1
4.2  Radius of line 114 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.17  -6.48  0.1
4.2  Radius of line 115 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -17.12  -6.74  0.1
4.2  Radius of line 116 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -14.11  -4.41  0.1
4.2  Radius of line 117 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -19.53  -1.5  0.1
4.2  Radius of line 118 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  4.96  7.0  0.0
4.2  Radius of line 119 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.3  7.36  0.0
4.2  Radius of line 120 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.69  9.75  0.0
4.2  Radius of line 121 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.56  13.11  0.0
4.2  Radius of line 122 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.76  11.14  0.0
4.2  Radius of line 123 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.85  11.4  0.0
4.2  Radius of line 124 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  15.46  15.08  0.0
4.2  Radius of line 125 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.94  15.94  0.0
4.2  Radius of line 126 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  14.25  17.07  0.0
4.2  Radius of line 127 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  17.35  21.71  0.0
4.2  Radius of line 128 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  13.22  19.05  0.0
4.2  Radius of line 129 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  10.56  15.6  0.0
4.2  Radius of line 130 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.03  12.33  0.0
4.2  Radius of line 131 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.29  12.76  0.0
4.2  Radius of line 132 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.0  17.76  0.0
4.2  Radius of line 133 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.16  21.96  0.0
4.2  Radius of line 134 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  11.75  24.89  0.0
4.2  Radius of line 135 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.69  21.46  0.0
4.2  Radius of line 136 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  6.69  22.14  0.0
4.2  Radius of line 137 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  7.37  26.1  0.0
4.2  Radius of line 138 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  9.34  26.6  0.0
4.2  Radius of line 139 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  5.57  28.51  0.0
4.2  Radius of line 140 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -21.69  -18.69  -0.05
4.2  Radius of line 141 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -23.57  -19.21  -0.05
4.2  Radius of line 142 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.73  -19.8  -0.05
4.2  Radius of line 143 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -27.87  -24.1  -0.05
4.2  Radius of line 144 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.21  -16.53  -0.05
4.2  Radius of line 145 at 0.045 <= 0.05.  (no action taken)
     B1      X, Y, Z:  -25.05  -12.75  -0.05
2.5  Seg length ending at pt. 10 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -0.19  -21.44  0.0
2.5  Seg length ending at pt. 43 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  6.51  -12.92  -0.05
2.5  Seg length ending at pt. 68 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -35.1  -45.85  0.14
2.5  Seg length ending at pt. 76 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -17.3  -31.5  0.14
2.5  Seg length ending at pt. 92 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -15.41  -47.49  0.1
2.5  Seg length ending at pt. 94 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  -12.32  -48.95  0.1
2.5  Seg length ending at pt. 108 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  -15.66  -13.18  0.1
2.4  Seg length ending at pt. 140 >= 6.0 stdevs above mean at 19.1219.  (no action taken)
     B1      X, Y, Z:  -21.69  -18.69  -0.05
2.1  Line 1 has 8 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  -6.9  -6.57  0.04
 
 


Number of type A irregularities = 7
Number of type B1 irregularities = 144
Number of type B2 irregularities = 0
Number of type C irregularities = 0
