# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\150810_6_inj6brbCre_oxt_001_Series018_Skeleton5_Done.swc.swc created with StdSwc version 1.31 on 2/10/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\150810_6_inj6brbCre_oxt_001_Series018_Skeleton5_Done.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 2.  (no action taken)
     B1      X, Y, Z:  231.91  105.01  124.57
4.5  Radius of terminal line 9 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 10 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 562 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 563 at 2.151 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.71  211.95  76.94
4.3  Radius of line 564 at 2.048 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.81  211.81  77.41
4.3  Radius of line 565 at 1.934 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.93  211.67  77.87
4.3  Radius of line 566 at 1.809 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  315.05  211.53  78.32
4.3  Radius of line 567 at 1.676 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  315.18  211.38  78.77
4.3  Radius of line 568 at 1.535 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  315.33  211.22  79.22
4.3  Radius of line 569 at 1.388 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  315.48  211.07  79.65
4.3  Radius of line 2289 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 2290 at 2.319 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.51  212.22  75.99
4.3  Radius of line 2291 at 2.384 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.42  212.34  75.51
4.3  Radius of line 2292 at 2.434 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.34  212.46  75.03
4.3  Radius of line 2293 at 2.47 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.25  212.58  74.54
4.3  Radius of line 2294 at 2.491 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.18  212.69  74.05
4.5  Radius of terminal line 2295 at 2.498 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.1  212.8  73.56
4.3  Radius of line 2296 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 2305 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.3  Radius of line 4972 at 2.241 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.5  Seg length ending at pt. 2 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.91  105.01  124.57
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.91  105.01  124.57
2.5  Seg length ending at pt. 6 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  231.92  105.02  124.57
2.5  Seg length ending at pt. 8 <= 0.1 at 0.0332.  (removed)
     A       X, Y, Z:  231.91  105.01  124.57
2.4  Seg length ending at pt. 9 >= 6.0 stdevs above mean at 143.5719.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 10 >= 6.0 stdevs above mean at 143.5875.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 11 >= 6.0 stdevs above mean at 144.0109.  (no action taken)
     B1      X, Y, Z:  231.73  104.76  124.95
2.4  Seg length ending at pt. 562 >= 6.0 stdevs above mean at 143.5875.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 2289 >= 6.0 stdevs above mean at 143.5933.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 2296 >= 6.0 stdevs above mean at 143.5933.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 2305 >= 6.0 stdevs above mean at 143.5933.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 2306 >= 6.0 stdevs above mean at 83.6371.  (no action taken)
     B1      X, Y, Z:  261.42  167.12  122.77
2.4  Seg length ending at pt. 2634 >= 6.0 stdevs above mean at 77.1825.  (no action taken)
     B1      X, Y, Z:  182.83  94.91  154.95
2.4  Seg length ending at pt. 2660 >= 6.0 stdevs above mean at 84.8143.  (no action taken)
     B1      X, Y, Z:  182.14  89.54  158.58
2.4  Seg length ending at pt. 4972 >= 6.0 stdevs above mean at 143.5933.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
2.4  Seg length ending at pt. 4973 >= 6.0 stdevs above mean at 160.0872.  (no action taken)
     B1      X, Y, Z:  211.61  113.35  149.06
2.5  Seg length ending at pt. 3 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.91  105.01  124.57
2.5  Seg length ending at pt. 7 <= 0.1 at 0.0245.  (removed)
     A       X, Y, Z:  231.94  105.02  124.58
2.5  Seg length ending at pt. 5 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  231.92  105.01  124.57
2.6  Line 9 and line 11 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
2.6  Line 9 and line 563 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
2.6  Line 9 and line 2290 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
2.6  Line 9 and line 2297 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
2.6  Line 9 and line 2306 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
2.6  Line 9 and line 4973 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.61  212.09  76.47
4.4  Line 9 of rad 2.241 links to 1 of rad 0.307.  (no action taken)
     B1      X, Y, Z:  314.61  212.09  76.47
4.4  Line 563 of rad 2.151 links to 1 of rad 0.307.  (no action taken)
     B1      X, Y, Z:  314.71  211.95  76.94
4.4  Line 2290 of rad 2.319 links to 1 of rad 0.307.  (no action taken)
     B1      X, Y, Z:  314.51  212.22  75.99
2.1  Line 1 has 7 daughters.  Type is 2.  (no action taken)
     B1      X, Y, Z:  231.91  105.01  124.57
 
 


Number of type A irregularities = 13
Number of type B1 irregularities = 37
Number of type B2 irregularities = 0
Number of type C irregularities = 0
