# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mc_Cell_7.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mc_Cell_7.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.5  Radius of terminal line 4 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  169.46  221.02  10.36
4.3  Radius of line 5 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  169.46  221.02  10.36
4.3  Radius of line 6 at 5.11995 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  169.67  221.38  11.92
4.3  Radius of line 7 at 4.79795 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  170.05  222.31  13.1
4.3  Radius of line 8 at 4.65606 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  170.55  223.43  13.92
4.3  Radius of line 9 at 4.5577 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.07  224.48  14.56
4.3  Radius of line 10 at 4.28881 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.58  225.41  15.15
4.3  Radius of line 11 at 3.82057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.12  226.26  15.72
4.3  Radius of line 12 at 3.16774 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.71  227.08  16.28
4.3  Radius of line 35 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.25  232.6  18.35
4.3  Radius of line 36 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  177.55  229.71  16.35
4.3  Radius of line 37 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  174.86  226.81  14.36
4.3  Radius of line 38 at 5.4565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  169.46  221.02  10.36
4.3  Radius of line 39 at 5.1037 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.98  219.89  11.67
4.5  Radius of terminal line 40 at 4.89211 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
4.3  Radius of line 83 at 4.89211 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
4.3  Radius of line 84 at 4.69896 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  167.91  217.9  13.39
4.3  Radius of line 85 at 4.28126 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  167.3  217.1  14.0
4.3  Radius of line 86 at 3.72023 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  166.58  216.33  14.45
4.3  Radius of line 87 at 3.03779 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.79  215.64  14.83
4.3  Radius of line 299 at 4.89211 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
4.3  Radius of line 300 at 4.37464 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  167.68  217.35  12.95
4.3  Radius of line 301 at 3.71018 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  166.91  216.12  13.15
4.3  Radius of line 302 at 3.0496 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  166.09  214.99  13.25
2.4  Seg length ending at pt. 35 >= 6.0 stdevs above mean at 17.1242.  (no action taken)
     B1      X, Y, Z:  180.25  232.6  18.35
2.4  Seg length ending at pt. 38 >= 6.0 stdevs above mean at 8.8704.  (no action taken)
     B1      X, Y, Z:  169.46  221.02  10.36
2.4  Seg length ending at pt. 41 >= 6.0 stdevs above mean at 26.59.  (no action taken)
     B1      X, Y, Z:  191.04  244.18  26.34
2.4  Seg length ending at pt. 83 >= 6.0 stdevs above mean at 14.8588.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
2.4  Seg length ending at pt. 299 >= 6.0 stdevs above mean at 19.2118.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
2.5  Seg length ending at pt. 728 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  199.43  247.84  30.52
2.5  Seg length ending at pt. 792 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  199.43  247.84  30.52
2.5  Seg length ending at pt. 927 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  204.47  264.55  30.74
2.5  Seg length ending at pt. 945 <= 0.1 at 0.0283.  (removed)
     A       X, Y, Z:  204.47  264.55  30.74
2.4  Seg length ending at pt. 1146 >= 6.0 stdevs above mean at 29.1992.  (no action taken)
     B1      X, Y, Z:  227.89  259.43  39.72
2.4  Seg length ending at pt. 1391 >= 6.0 stdevs above mean at 21.3521.  (no action taken)
     B1      X, Y, Z:  250.22  272.59  49.59
2.4  Seg length ending at pt. 1400 >= 6.0 stdevs above mean at 26.6502.  (no action taken)
     B1      X, Y, Z:  259.48  283.32  66.23
2.4  Seg length ending at pt. 1890 >= 6.0 stdevs above mean at 13.7562.  (no action taken)
     B1      X, Y, Z:  328.05  291.89  48.32
2.4  Seg length ending at pt. 1918 >= 6.0 stdevs above mean at 14.411.  (no action taken)
     B1      X, Y, Z:  341.55  296.74  49.7
2.4  Seg length ending at pt. 2984 >= 6.0 stdevs above mean at 20.3539.  (no action taken)
     B1      X, Y, Z:  439.13  358.76  76.34
2.6  Line 4 and line 6 have the same coordinates.  (second line removed)
     A      X, Y, Z:  169.46  221.02  10.36
2.6  Line 4 and line 38 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  169.46  221.02  10.36
2.6  Line 40 and line 83 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
2.6  Line 40 and line 299 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
2.6  Line 41 and line 718 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  191.04  244.18  26.34
2.6  Line 83 and line 299 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.38  218.66  12.53
2.6  Line 99 and line 166 have the same coordinates.  (second line removed)
     A      X, Y, Z:  153.46  210.13  17.13
2.6  Line 111 and line 129 have the same coordinates.  (second line removed)
     A      X, Y, Z:  138.87  208.71  15.89
2.6  Line 174 and line 240 have the same coordinates.  (second line removed)
     A      X, Y, Z:  144.34  208.65  19.28
2.6  Line 200 and line 221 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.94  185.49  26.32
2.6  Line 321 and line 402 have the same coordinates.  (second line removed)
     A      X, Y, Z:  151.45  196.8  15.11
2.6  Line 342 and line 374 have the same coordinates.  (second line removed)
     A      X, Y, Z:  148.54  173.28  22.42
2.6  Line 482 and line 666 have the same coordinates.  (second line removed)
     A      X, Y, Z:  88.22  142.71  54.01
2.6  Line 494 and line 634 have the same coordinates.  (second line removed)
     A      X, Y, Z:  76.83  140.88  61.36
2.6  Line 529 and line 549 have the same coordinates.  (second line removed)
     A      X, Y, Z:  39.3  136.51  53.82
2.6  Line 565 and line 617 have the same coordinates.  (second line removed)
     A      X, Y, Z:  41.9  139.33  67.5
2.6  Line 743 and line 770 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.0  246.06  44.96
2.6  Line 847 and line 909 have the same coordinates.  (second line removed)
     A      X, Y, Z:  203.12  248.54  31.39
2.6  Line 852 and line 868 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.51  246.45  35.43
2.6  Line 913 and line 1057 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.85  250.43  32.77
2.6  Line 981 and line 995 have the same coordinates.  (second line removed)
     A      X, Y, Z:  211.35  277.12  27.87
2.6  Line 999 and line 1034 have the same coordinates.  (second line removed)
     A      X, Y, Z:  214.99  280.97  29.49
2.6  Line 1068 and line 1084 have the same coordinates.  (second line removed)
     A      X, Y, Z:  220.77  255.08  37.02
2.6  Line 1086 and line 1113 have the same coordinates.  (second line removed)
     A      X, Y, Z:  223.11  256.39  37.61
2.6  Line 1117 and line 1162 have the same coordinates.  (second line removed)
     A      X, Y, Z:  228.12  258.12  38.35
2.6  Line 1118 and line 1146 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  227.89  259.43  39.72
2.6  Line 1165 and line 1288 have the same coordinates.  (second line removed)
     A      X, Y, Z:  231.81  259.71  38.55
2.6  Line 1177 and line 1222 have the same coordinates.  (second line removed)
     A      X, Y, Z:  243.43  251.25  34.63
2.6  Line 1296 and line 1355 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.12  264.83  40.8
2.6  Line 1324 and line 1338 have the same coordinates.  (second line removed)
     A      X, Y, Z:  240.03  299.19  43.93
2.6  Line 1359 and line 1527 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.95  267.17  41.33
2.6  Line 1360 and line 1394 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  246.16  267.88  42.29
2.6  Line 1399 and line 1421 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.72  271.82  47.17
2.6  Line 1399 and line 1438 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.72  271.82  47.17
2.6  Line 1400 and line 1486 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  259.48  283.32  66.23
2.6  Line 1421 and line 1438 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.72  271.82  47.17
2.6  Line 1536 and line 1635 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.61  270.29  40.97
2.6  Line 1639 and line 1669 have the same coordinates.  (second line removed)
     A      X, Y, Z:  262.92  271.33  41.66
2.6  Line 1688 and line 1734 have the same coordinates.  (second line removed)
     A      X, Y, Z:  287.53  277.33  43.69
2.6  Line 1741 and line 1808 have the same coordinates.  (second line removed)
     A      X, Y, Z:  296.23  280.57  45.15
2.6  Line 1814 and line 1842 have the same coordinates.  (second line removed)
     A      X, Y, Z:  303.7  283.44  46.18
2.6  Line 1853 and line 1870 have the same coordinates.  (second line removed)
     A      X, Y, Z:  317.51  288.23  47.42
2.6  Line 1872 and line 3198 have the same coordinates.  (second line removed)
     A      X, Y, Z:  320.13  289.02  47.54
2.6  Line 1873 and line 1891 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  321.42  289.5  47.64
2.6  Line 1918 and line 1959 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  341.55  296.74  49.7
2.6  Line 1969 and line 2069 have the same coordinates.  (second line removed)
     A      X, Y, Z:  352.52  301.6  51.4
2.6  Line 1977 and line 1998 have the same coordinates.  (second line removed)
     A      X, Y, Z:  359.21  296.09  49.59
2.6  Line 2004 and line 2033 have the same coordinates.  (second line removed)
     A      X, Y, Z:  366.28  293.76  48.36
2.6  Line 2090 and line 2119 have the same coordinates.  (second line removed)
     A      X, Y, Z:  378.29  313.48  51.55
2.6  Line 2140 and line 2524 have the same coordinates.  (second line removed)
     A      X, Y, Z:  405.97  311.1  54.59
2.6  Line 2172 and line 2233 have the same coordinates.  (second line removed)
     A      X, Y, Z:  439.06  300.89  69.25
2.6  Line 2243 and line 2322 have the same coordinates.  (second line removed)
     A      X, Y, Z:  447.14  310.65  68.17
2.6  Line 2335 and line 2437 have the same coordinates.  (second line removed)
     A      X, Y, Z:  460.55  319.96  64.06
2.6  Line 2547 and line 2920 have the same coordinates.  (second line removed)
     A      X, Y, Z:  431.27  323.16  48.2
2.6  Line 2588 and line 2751 have the same coordinates.  (second line removed)
     A      X, Y, Z:  474.82  348.91  34.97
2.6  Line 2596 and line 2689 have the same coordinates.  (second line removed)
     A      X, Y, Z:  477.93  356.74  28.95
2.6  Line 2768 and line 2865 have the same coordinates.  (second line removed)
     A      X, Y, Z:  495.22  341.3  38.2
2.6  Line 2782 and line 2818 have the same coordinates.  (second line removed)
     A      X, Y, Z:  508.29  348.63  42.3
2.6  Line 2945 and line 3034 have the same coordinates.  (second line removed)
     A      X, Y, Z:  435.75  351.3  61.07
2.6  Line 2961 and line 3011 have the same coordinates.  (second line removed)
     A      X, Y, Z:  438.77  358.69  75.52
2.6  Line 2962 and line 2984 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  439.13  358.76  76.34
2.6  Line 3087 and line 3143 have the same coordinates.  (second line removed)
     A      X, Y, Z:  487.17  395.52  63.89
4.4  Line 35 of rad 5.4565 links to 34 of rad 1.5.  (no action taken)
     B1      X, Y, Z:  180.25  232.6  18.35
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  169.3  221.33  8.65
 
 


Number of type A irregularities = 52
Number of type B1 irregularities = 51
Number of type B2 irregularities = 0
Number of type C irregularities = 0
