# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mc_Cell.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mc_Cell.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.5  Radius of terminal line 1504 at 1.79709 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.76  329.03  84.93
4.3  Radius of line 2517 at 2.74455 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  102.65  312.68  140.79
4.3  Radius of line 2518 at 3.2508 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  101.51  312.3  141.75
4.3  Radius of line 2519 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.81  311.95  142.12
4.3  Radius of line 2600 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.12  311.61  142.49
4.3  Radius of line 2601 at 4.56827 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.34  310.62  142.97
4.3  Radius of line 2602 at 4.87366 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.99  310.43  145.05
4.3  Radius of line 2603 at 4.6928 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  95.43  310.2  145.88
4.3  Radius of line 2604 at 4.21497 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  93.79  310.1  145.91
4.3  Radius of line 2605 at 3.54025 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  92.24  310.16  145.81
4.3  Radius of line 2606 at 2.71409 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  90.78  310.3  145.71
4.3  Radius of line 2617 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.05  312.14  144.98
4.3  Radius of line 2618 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.74  311.96  144.15
4.3  Radius of line 2619 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.12  311.61  142.49
4.3  Radius of line 2620 at 3.81313 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.4  311.9  141.03
4.3  Radius of line 2621 at 3.80265 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.56  312.01  139.72
4.3  Radius of line 2622 at 3.79542 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.59  312.01  138.55
4.3  Radius of line 2623 at 3.79778 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.58  312.01  137.48
4.3  Radius of line 2624 at 3.79096 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.54  312.01  136.47
4.3  Radius of line 2625 at 3.71882 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.5  312.02  135.48
4.3  Radius of line 2626 at 3.54551 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.44  312.04  134.5
4.3  Radius of line 2627 at 3.2976 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.37  312.06  133.51
4.3  Radius of line 2628 at 2.98162 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.31  312.1  132.51
4.3  Radius of line 2680 at 3.82125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.12  311.61  142.49
4.3  Radius of line 2681 at 3.15654 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.6  312.73  141.86
2.4  Seg length ending at pt. 141 >= 6.0 stdevs above mean at 157.6676.  (no action taken)
     B1      X, Y, Z:  361.61  365.78  69.46
2.4  Seg length ending at pt. 183 >= 6.0 stdevs above mean at 36.8928.  (no action taken)
     B1      X, Y, Z:  369.22  368.03  68.37
2.4  Seg length ending at pt. 200 >= 6.0 stdevs above mean at 37.5089.  (no action taken)
     B1      X, Y, Z:  405.8  375.43  64.62
2.4  Seg length ending at pt. 419 >= 6.0 stdevs above mean at 95.9073.  (no action taken)
     B1      X, Y, Z:  447.82  349.39  99.29
2.4  Seg length ending at pt. 469 >= 6.0 stdevs above mean at 96.6323.  (no action taken)
     B1      X, Y, Z:  447.82  349.39  99.29
2.4  Seg length ending at pt. 738 >= 6.0 stdevs above mean at 56.1177.  (no action taken)
     B1      X, Y, Z:  298.61  355.14  61.67
2.4  Seg length ending at pt. 791 >= 6.0 stdevs above mean at 39.3729.  (no action taken)
     B1      X, Y, Z:  304.25  357.2  48.52
2.7  Line 1709 of rad 1.54727 is an included side branch.  (removed)
     A      X, Y, Z:  179.19  327.88  93.91
2.6  Line 140 and line 141 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  361.61  365.78  69.46
2.6  Line 140 and line 146 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  361.61  365.78  69.46
2.6  Line 141 and line 146 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  361.61  365.78  69.46
2.6  Line 147 and line 149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  363.37  366.85  68.97
2.6  Line 147 and line 184 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  363.37  366.85  68.97
2.6  Line 200 and line 228 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  405.8  375.43  64.62
2.6  Line 232 and line 267 have the same coordinates.  (second line removed)
     A      X, Y, Z:  409.3  374.58  64.55
2.6  Line 321 and line 340 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  356.83  364.24  70.34
2.6  Line 418 and line 419 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  447.82  349.39  99.29
2.6  Line 418 and line 469 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  447.82  349.39  99.29
2.6  Line 419 and line 469 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  447.82  349.39  99.29
2.6  Line 424 and line 447 have the same coordinates.  (second line removed)
     A      X, Y, Z:  451.23  349.25  103.08
2.6  Line 514 and line 532 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  334.95  355.23  70.63
2.6  Line 541 and line 542 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  337.58  358.93  62.53
2.6  Line 541 and line 553 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  337.58  358.93  62.53
2.6  Line 542 and line 553 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  337.58  358.93  62.53
2.6  Line 658 and line 672 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  313.37  353.83  67.38
2.6  Line 694 and line 738 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  298.61  355.14  61.67
2.6  Line 745 and line 746 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  302.89  357.94  55.67
2.6  Line 745 and line 975 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  302.89  357.94  55.67
2.6  Line 746 and line 975 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  302.89  357.94  55.67
2.6  Line 753 and line 797 have the same coordinates.  (second line removed)
     A      X, Y, Z:  304.04  357.48  49.79
2.6  Line 754 and line 791 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  304.25  357.2  48.52
2.6  Line 814 and line 888 have the same coordinates.  (second line removed)
     A      X, Y, Z:  316.75  363.54  38.53
2.6  Line 1113 and line 1124 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  243.8  345.33  72.71
2.6  Line 1148 and line 3263 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  233.37  343.98  74.8
2.6  Line 1148 and line 3282 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  233.37  343.98  74.8
2.6  Line 1149 and line 1152 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.2  343.61  75.31
2.6  Line 1186 and line 1192 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  229.85  342.74  76.2
2.6  Line 1207 and line 3247 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  225.14  341.19  77.96
2.6  Line 1208 and line 1220 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  223.97  340.8  78.33
2.6  Line 1233 and line 3226 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  211.83  337.88  82.1
2.6  Line 1234 and line 1248 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  210.64  337.55  82.53
2.6  Line 1308 and line 1311 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  195.3  333.27  88.27
2.6  Line 1314 and line 1315 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  197.42  333.8  89.02
2.6  Line 1314 and line 1318 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  197.42  333.8  89.02
2.6  Line 1315 and line 1318 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  197.42  333.8  89.02
2.6  Line 1359 and line 1365 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  193.06  332.04  88.92
2.6  Line 1378 and line 1379 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  198.85  317.38  85.28
2.6  Line 1378 and line 1404 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  198.85  317.38  85.28
2.6  Line 1379 and line 1404 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  198.85  317.38  85.28
2.6  Line 1423 and line 1439 have the same coordinates.  (second line removed)
     A      X, Y, Z:  216.01  301.42  81.34
2.6  Line 1473 and line 1481 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.09  329.77  90.27
2.6  Line 1473 and line 1498 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.09  329.77  90.27
2.6  Line 1481 and line 1499 have the same coordinates.  (second line removed)
     A      X, Y, Z:  187.09  329.77  90.27
2.6  Line 1504 and line 1505 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.76  329.03  84.93
2.6  Line 1504 and line 1512 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.76  329.03  84.93
2.6  Line 1505 and line 1512 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  187.76  329.03  84.93
2.6  Line 1515 and line 1539 have the same coordinates.  (second line removed)
     A      X, Y, Z:  188.53  328.84  82.98
2.6  Line 1544 and line 1592 have the same coordinates.  (second line removed)
     A      X, Y, Z:  192.44  328.51  79.69
2.6  Line 1559 and line 1574 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.32  329.43  69.12
2.6  Line 1617 and line 1635 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.39  316.06  67.75
2.6  Line 1691 and line 3209 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  181.32  328.53  92.74
2.6  Line 1692 and line 1708 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  180.18  328.26  93.23
2.6  Line 1710 and line 1714 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  179.19  327.88  93.91
2.6  Line 1721 and line 3061 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  177.35  327.2  95.47
2.6  Line 1722 and line 1731 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  176.43  326.89  96.19
2.6  Line 1748 and line 1753 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  167.65  324.59  100.51
2.6  Line 1756 and line 1757 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  169.91  325.19  99.23
2.6  Line 1756 and line 1765 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  169.91  325.19  99.23
2.6  Line 1757 and line 1765 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  169.91  325.19  99.23
2.6  Line 1769 and line 1797 have the same coordinates.  (second line removed)
     A      X, Y, Z:  172.31  326.5  96.21
2.6  Line 1776 and line 1781 have the same coordinates.  (second line removed)
     A      X, Y, Z:  173.86  326.06  90.94
2.6  Line 1856 and line 1873 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  163.55  323.8  102.95
2.6  Line 1876 and line 3008 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  147.8  320.4  111.75
2.6  Line 1877 and line 1881 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  146.88  320.18  112.4
2.6  Line 1901 and line 1902 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  133.83  334.87  100.81
2.6  Line 1901 and line 1906 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  133.83  334.87  100.81
2.6  Line 1902 and line 1906 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  133.83  334.87  100.81
2.6  Line 1933 and line 1940 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  144.37  319.15  114.7
2.6  Line 1952 and line 1953 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  152.71  331.33  115.13
2.6  Line 1952 and line 2059 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  152.71  331.33  115.13
2.6  Line 1953 and line 2059 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  152.71  331.33  115.13
2.6  Line 1954 and line 1959 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  153.66  332.34  115.1
2.6  Line 1971 and line 2014 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  156.38  335.32  115.77
2.6  Line 2069 and line 2084 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.15  334.37  109.27
2.6  Line 2109 and line 2119 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  138.78  317.97  118.95
2.6  Line 2134 and line 2135 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  149.3  305.15  111.87
2.6  Line 2134 and line 2174 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  149.3  305.15  111.87
2.6  Line 2135 and line 2174 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  149.3  305.15  111.87
2.6  Line 2187 and line 2209 have the same coordinates.  (second line removed)
     A      X, Y, Z:  158.11  296.78  104.94
2.6  Line 2239 and line 2244 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  130.24  316.22  124.94
2.6  Line 2275 and line 2852 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  127.37  315.48  126.87
2.6  Line 2276 and line 2279 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  126.29  315.15  127.42
2.6  Line 2350 and line 2356 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  124.15  314.76  128.58
2.6  Line 2391 and line 2396 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  118.86  314.26  131.62
2.6  Line 2453 and line 2457 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  115.18  313.62  134.29
2.6  Line 2509 and line 2520 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  111.77  313.34  135.86
2.6  Line 2600 and line 2619 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.12  311.61  142.49
2.6  Line 2600 and line 2680 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.12  311.61  142.49
2.6  Line 2619 and line 2681 have the same coordinates.  (second line removed)
     A      X, Y, Z:  100.12  311.61  142.49
2.6  Line 2762 and line 2820 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  77.36  312.32  145.81
2.6  Line 2772 and line 2787 have the same coordinates.  (second line removed)
     A      X, Y, Z:  64.86  307.91  143.44
2.6  Line 2867 and line 2941 have the same coordinates.  (second line removed)
     A      X, Y, Z:  139.12  300.64  123.68
2.6  Line 2871 and line 2899 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.91  299.14  121.84
2.6  Line 3068 and line 3157 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.13  332.31  93.34
2.6  Line 3083 and line 3125 have the same coordinates.  (second line removed)
     A      X, Y, Z:  176.53  346.85  97.82
2.6  Line 3263 and line 3282 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  233.37  343.98  74.8
2.6  Line 3268 and line 3272 have the same coordinates.  (second line removed)
     A      X, Y, Z:  234.75  344.79  71.17
4.4  Line 2617 of rad 3.82125 links to 2616 of rad 1.5.  (no action taken)
     B1      X, Y, Z:  83.05  312.14  144.98
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  504.96  300.66  61.14
 
 


Number of type A irregularities = 23
Number of type B1 irregularities = 111
Number of type B2 irregularities = 0
Number of type C irregularities = 0
