# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_5.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_5.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 6.8844 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.11  262.72  0.67
4.3  Radius of line 5 at 6.3656 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.07  261.56  0.7
4.3  Radius of line 6 at 5.62335 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  163.48  260.55  0.85
4.3  Radius of line 7 at 4.80517 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  163.01  259.56  0.91
4.3  Radius of line 18 at 7.21335 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  166.86  264.13  1.01
4.5  Radius of terminal line 19 at 7.0733 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
4.3  Radius of line 20 at 7.0733 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
4.3  Radius of line 21 at 6.75855 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.79  263.74  3.06
4.3  Radius of line 22 at 6.21905 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  163.96  263.59  3.79
4.3  Radius of line 23 at 5.515 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  163.13  263.44  4.4
4.3  Radius of line 24 at 4.87283 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  162.29  263.27  4.94
4.3  Radius of line 35 at 7.0733 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  159.65  262.19  5.61
4.3  Radius of line 36 at 7.0733 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
4.3  Radius of line 37 at 6.8097 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.45  264.31  3.47
4.3  Radius of line 38 at 6.4208 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.08  264.59  4.57
4.3  Radius of line 39 at 5.90305 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.63  264.83  5.52
4.3  Radius of line 40 at 5.2432 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.19  265.13  6.42
4.3  Radius of line 41 at 4.44454 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  163.78  265.51  7.28
4.3  Radius of line 674 at 7.21335 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  166.86  264.13  1.01
4.3  Radius of line 675 at 6.7629 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  167.65  264.71  1.07
4.3  Radius of line 676 at 6.7629 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.45  265.29  1.13
4.3  Radius of line 677 at 6.1694 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  169.64  266.04  1.54
4.3  Radius of line 678 at 5.5548 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  170.6  266.55  2.06
4.3  Radius of line 679 at 5.0495 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.53  266.99  2.51
4.3  Radius of line 680 at 4.59839 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.45  267.37  2.92
2.5  Seg length ending at pt. 18 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  166.86  264.13  1.01
2.4  Seg length ending at pt. 20 >= 6.0 stdevs above mean at 13.6552.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
2.5  Seg length ending at pt. 611 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  123.41  288.08  13.56
2.5  Seg length ending at pt. 626 <= 0.1 at 0.0316.  (removed)
     A       X, Y, Z:  123.41  288.08  13.56
2.5  Seg length ending at pt. 674 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  166.86  264.13  1.01
2.4  Seg length ending at pt. 712 >= 6.0 stdevs above mean at 37.285.  (no action taken)
     B1      X, Y, Z:  201.4  275.97  12.22
2.4  Seg length ending at pt. 774 >= 6.0 stdevs above mean at 74.914.  (no action taken)
     B1      X, Y, Z:  201.4  275.97  12.22
2.4  Seg length ending at pt. 1759 >= 6.0 stdevs above mean at 25.1376.  (no action taken)
     B1      X, Y, Z:  284.7  322.85  27.59
2.4  Seg length ending at pt. 1767 >= 6.0 stdevs above mean at 29.307.  (no action taken)
     B1      X, Y, Z:  303.55  339.41  33.12
2.5  Seg length ending at pt. 2359 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  306.44  302.62  30.6
2.5  Seg length ending at pt. 2398 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  306.44  302.62  30.6
2.5  Seg length ending at pt. 2477 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  320.38  301.22  33.41
2.5  Seg length ending at pt. 2507 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  320.38  301.22  33.41
2.4  Seg length ending at pt. 2811 >= 6.0 stdevs above mean at 10.2579.  (no action taken)
     B1      X, Y, Z:  349.92  302.56  39.06
2.4  Seg length ending at pt. 2812 >= 6.0 stdevs above mean at 10.7152.  (no action taken)
     B1      X, Y, Z:  339.27  302.53  37.88
2.4  Seg length ending at pt. 2890 >= 6.0 stdevs above mean at 10.7263.  (no action taken)
     B1      X, Y, Z:  360.58  302.59  40.25
2.4  Seg length ending at pt. 3101 >= 6.0 stdevs above mean at 44.2517.  (no action taken)
     B1      X, Y, Z:  382.11  302.69  37.87
2.6  Line 19 and line 20 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
2.6  Line 19 and line 36 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
2.6  Line 20 and line 36 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
2.6  Line 96 and line 413 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  153.57  260.46  9.07
2.6  Line 115 and line 172 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.33  249.62  19.62
2.6  Line 121 and line 138 have the same coordinates.  (second line removed)
     A      X, Y, Z:  137.3  247.6  21.8
2.6  Line 143 and line 157 have the same coordinates.  (second line removed)
     A      X, Y, Z:  133.63  246.39  23.58
2.6  Line 185 and line 231 have the same coordinates.  (second line removed)
     A      X, Y, Z:  135.53  243.58  28.97
2.6  Line 241 and line 264 have the same coordinates.  (second line removed)
     A      X, Y, Z:  128.29  240.43  34.36
2.6  Line 275 and line 400 have the same coordinates.  (second line removed)
     A      X, Y, Z:  118.01  236.68  37.81
2.6  Line 276 and line 292 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  117.14  236.03  38.33
2.6  Line 318 and line 337 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  109.89  228.25  48.08
2.6  Line 450 and line 540 have the same coordinates.  (second line removed)
     A      X, Y, Z:  121.55  272.66  17.68
2.6  Line 542 and line 588 have the same coordinates.  (second line removed)
     A      X, Y, Z:  119.65  273.43  17.89
2.6  Line 711 and line 712 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  201.4  275.97  12.22
2.6  Line 711 and line 774 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  201.4  275.97  12.22
2.6  Line 712 and line 774 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  201.4  275.97  12.22
2.6  Line 788 and line 915 have the same coordinates.  (second line removed)
     A      X, Y, Z:  213.97  280.08  13.85
2.6  Line 848 and line 883 have the same coordinates.  (second line removed)
     A      X, Y, Z:  267.91  263.93  8.69
2.6  Line 917 and line 957 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.93  280.7  14.22
2.6  Line 960 and line 983 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.7  281.76  14.83
2.6  Line 985 and line 1157 have the same coordinates.  (second line removed)
     A      X, Y, Z:  220.39  282.77  15.24
2.6  Line 1002 and line 1025 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.62  297.03  23.98
2.6  Line 1032 and line 1069 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.17  303.99  26.12
2.6  Line 1080 and line 1107 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.27  315.13  26.73
2.6  Line 1170 and line 1435 have the same coordinates.  (second line removed)
     A      X, Y, Z:  232.78  287.14  17.53
2.6  Line 1181 and line 1276 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.71  282.27  18.61
2.6  Line 1188 and line 1211 have the same coordinates.  (second line removed)
     A      X, Y, Z:  242.65  275.94  15.58
2.6  Line 1303 and line 1343 have the same coordinates.  (second line removed)
     A      X, Y, Z:  267.92  275.58  20.76
2.6  Line 1450 and line 1650 have the same coordinates.  (second line removed)
     A      X, Y, Z:  245.79  294.73  19.97
2.6  Line 1451 and line 1455 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  246.13  295.07  19.9
2.6  Line 1481 and line 1533 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  247.47  296.33  19.08
2.6  Line 1563 and line 1608 have the same coordinates.  (second line removed)
     A      X, Y, Z:  250.53  324.76  17.49
2.6  Line 1662 and line 1694 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.8  299.63  22.4
2.6  Line 1711 and line 2067 have the same coordinates.  (second line removed)
     A      X, Y, Z:  273.19  304.48  25.05
2.6  Line 1725 and line 2020 have the same coordinates.  (second line removed)
     A      X, Y, Z:  278.79  317.48  26.01
2.6  Line 1726 and line 1762 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  279.41  318.2  26.03
2.6  Line 1766 and line 1850 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  281.61  320.56  25.03
2.6  Line 1766 and line 1916 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  281.61  320.56  25.03
2.6  Line 1767 and line 1962 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  303.55  339.41  33.12
2.6  Line 1850 and line 1916 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  281.61  320.56  25.03
2.6  Line 2075 and line 2237 have the same coordinates.  (second line removed)
     A      X, Y, Z:  281.36  305.51  26.34
2.6  Line 2079 and line 2144 have the same coordinates.  (second line removed)
     A      X, Y, Z:  283.46  306.72  28.68
2.6  Line 2155 and line 2208 have the same coordinates.  (second line removed)
     A      X, Y, Z:  283.1  309.45  38.42
2.6  Line 2174 and line 2188 have the same coordinates.  (second line removed)
     A      X, Y, Z:  287.77  312.69  55.02
2.6  Line 2242 and line 2338 have the same coordinates.  (second line removed)
     A      X, Y, Z:  286.41  305.33  26.99
2.6  Line 2526 and line 2548 have the same coordinates.  (second line removed)
     A      X, Y, Z:  333.93  314.6  32.29
2.6  Line 2609 and line 2712 have the same coordinates.  (second line removed)
     A      X, Y, Z:  330.4  301.83  35.74
2.6  Line 2644 and line 2659 have the same coordinates.  (second line removed)
     A      X, Y, Z:  361.05  291.11  28.68
2.6  Line 2672 and line 2696 have the same coordinates.  (second line removed)
     A      X, Y, Z:  369.7  282.03  27.69
2.6  Line 2714 and line 2782 have the same coordinates.  (second line removed)
     A      X, Y, Z:  332.46  302.1  36.17
2.6  Line 2788 and line 3362 have the same coordinates.  (second line removed)
     A      X, Y, Z:  338.26  302.58  37.59
2.6  Line 2789 and line 2812 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  339.27  302.53  37.88
2.6  Line 2890 and line 3032 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  360.58  302.59  40.25
2.6  Line 2900 and line 2934 have the same coordinates.  (second line removed)
     A      X, Y, Z:  367.91  307.8  44.24
2.6  Line 2963 and line 3000 have the same coordinates.  (second line removed)
     A      X, Y, Z:  396.43  315.91  50.67
2.6  Line 3054 and line 3124 have the same coordinates.  (second line removed)
     A      X, Y, Z:  381.69  303.4  38.07
2.6  Line 3055 and line 3101 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  382.11  302.69  37.87
2.6  Line 3146 and line 3163 have the same coordinates.  (second line removed)
     A      X, Y, Z:  403.96  306.83  36.84
2.6  Line 3173 and line 3189 have the same coordinates.  (second line removed)
     A      X, Y, Z:  414.18  307.86  36.03
2.6  Line 3199 and line 3313 have the same coordinates.  (second line removed)
     A      X, Y, Z:  423.81  311.23  35.97
2.6  Line 3223 and line 3252 have the same coordinates.  (second line removed)
     A      X, Y, Z:  446.32  314.64  37.53
4.4  Line 20 of rad 7.0733 links to 17 of rad 1.5.  (no action taken)
     B1      X, Y, Z:  165.72  263.92  2.15
4.4  Line 35 of rad 7.0733 links to 34 of rad 2.64918.  (no action taken)
     B1      X, Y, Z:  159.65  262.19  5.61
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  166.86  264.13  1.01
 
 


Number of type A irregularities = 51
Number of type B1 irregularities = 56
Number of type B2 irregularities = 0
Number of type C irregularities = 0
