# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_3.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_3.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.5  Radius of terminal line 4 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  475.64  280.52  4.21
4.3  Radius of line 5 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  475.64  280.52  4.21
4.3  Radius of line 6 at 5.22795 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  475.33  280.88  5.97
4.3  Radius of line 7 at 5.03495 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  474.67  281.4  7.29
4.3  Radius of line 8 at 4.74521 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  473.99  281.95  8.3
4.3  Radius of line 9 at 4.39413 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  473.42  282.42  9.12
4.3  Radius of line 10 at 4.051 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  472.92  282.76  9.87
4.3  Radius of line 11 at 3.84914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  472.45  283.02  10.63
4.3  Radius of line 12 at 3.78908 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  471.99  283.3  11.42
4.3  Radius of line 13 at 3.64085 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  471.5  283.62  12.26
4.3  Radius of line 14 at 3.28001 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  470.94  283.92  13.16
4.3  Radius of line 43 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  463.1  286.55  19.62
4.3  Radius of line 44 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  466.24  285.04  15.77
4.3  Radius of line 45 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  469.37  283.54  11.91
4.3  Radius of line 46 at 5.3058 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  475.64  280.52  4.21
4.3  Radius of line 47 at 5.27155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  476.71  279.22  5.61
4.3  Radius of line 48 at 5.1177 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  477.67  278.11  6.67
4.5  Radius of terminal line 49 at 4.68171 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
4.3  Radius of line 198 at 4.68171 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
4.3  Radius of line 199 at 4.45025 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  479.17  276.42  8.0
4.3  Radius of line 200 at 4.09703 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  479.8  275.69  8.6
4.3  Radius of line 201 at 3.58687 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  480.41  274.99  9.21
4.3  Radius of line 304 at 4.68171 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
4.3  Radius of line 305 at 4.29274 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  479.39  276.15  7.96
4.3  Radius of line 306 at 3.77013 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  480.17  275.2  8.43
2.4  Seg length ending at pt. 43 >= 6.0 stdevs above mean at 20.2222.  (no action taken)
     B1      X, Y, Z:  463.1  286.55  19.62
2.4  Seg length ending at pt. 50 >= 6.0 stdevs above mean at 31.1431.  (no action taken)
     B1      X, Y, Z:  450.56  292.57  35.03
2.4  Seg length ending at pt. 198 >= 6.0 stdevs above mean at 16.8764.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
2.4  Seg length ending at pt. 304 >= 6.0 stdevs above mean at 21.8535.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
2.4  Seg length ending at pt. 696 >= 6.0 stdevs above mean at 18.7263.  (no action taken)
     B1      X, Y, Z:  429.17  301.16  56.67
2.4  Seg length ending at pt. 808 >= 6.0 stdevs above mean at 27.2043.  (no action taken)
     B1      X, Y, Z:  412.94  319.05  72.79
2.4  Seg length ending at pt. 953 >= 6.0 stdevs above mean at 25.1561.  (no action taken)
     B1      X, Y, Z:  388.03  307.47  75.08
2.4  Seg length ending at pt. 1021 >= 6.0 stdevs above mean at 44.3659.  (no action taken)
     B1      X, Y, Z:  377.8  318.25  76.19
2.4  Seg length ending at pt. 1372 >= 6.0 stdevs above mean at 16.8753.  (no action taken)
     B1      X, Y, Z:  362.65  304.56  79.86
2.4  Seg length ending at pt. 1390 >= 6.0 stdevs above mean at 17.5097.  (no action taken)
     B1      X, Y, Z:  347.64  296.63  75.57
2.4  Seg length ending at pt. 1457 >= 6.0 stdevs above mean at 16.2665.  (no action taken)
     B1      X, Y, Z:  332.0  286.37  69.48
2.4  Seg length ending at pt. 2674 >= 6.0 stdevs above mean at 27.8469.  (no action taken)
     B1      X, Y, Z:  402.15  343.81  79.57
2.7  Line 697 of rad 1.78024 is an included side branch.  (removed)
     A      X, Y, Z:  428.48  301.38  57.6
2.6  Line 4 and line 6 have the same coordinates.  (second line removed)
     A      X, Y, Z:  475.64  280.52  4.21
2.6  Line 4 and line 46 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  475.64  280.52  4.21
2.6  Line 49 and line 198 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
2.6  Line 49 and line 304 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
2.6  Line 50 and line 492 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  450.56  292.57  35.03
2.6  Line 54 and line 86 have the same coordinates.  (second line removed)
     A      X, Y, Z:  449.44  291.13  37.61
2.6  Line 198 and line 304 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  478.57  277.12  7.4
2.6  Line 229 and line 245 have the same coordinates.  (second line removed)
     A      X, Y, Z:  508.74  262.92  14.36
2.6  Line 316 and line 378 have the same coordinates.  (second line removed)
     A      X, Y, Z:  487.41  266.65  10.44
2.6  Line 403 and line 431 have the same coordinates.  (second line removed)
     A      X, Y, Z:  497.32  237.5  7.47
2.6  Line 505 and line 558 have the same coordinates.  (second line removed)
     A      X, Y, Z:  441.15  296.58  43.56
2.6  Line 562 and line 647 have the same coordinates.  (second line removed)
     A      X, Y, Z:  438.56  297.95  46.98
2.6  Line 586 and line 603 have the same coordinates.  (second line removed)
     A      X, Y, Z:  413.09  305.91  38.61
2.6  Line 653 and line 673 have the same coordinates.  (second line removed)
     A      X, Y, Z:  434.18  299.7  51.93
2.6  Line 678 and line 2805 have the same coordinates.  (second line removed)
     A      X, Y, Z:  429.98  300.94  55.8
2.6  Line 679 and line 696 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  429.17  301.16  56.67
2.6  Line 698 and line 707 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  428.48  301.38  57.6
2.6  Line 721 and line 740 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  425.0  302.04  64.41
2.6  Line 743 and line 765 have the same coordinates.  (second line removed)
     A      X, Y, Z:  423.04  302.26  65.88
2.6  Line 767 and line 2766 have the same coordinates.  (second line removed)
     A      X, Y, Z:  420.99  302.58  67.47
2.6  Line 768 and line 2049 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  419.99  302.87  68.37
2.6  Line 768 and line 2051 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  419.99  302.87  68.37
2.6  Line 810 and line 824 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  419.21  303.01  69.47
2.6  Line 810 and line 2050 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  419.21  303.01  69.47
2.6  Line 824 and line 2050 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  419.21  303.01  69.47
2.6  Line 852 and line 869 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  405.8  307.2  71.58
2.6  Line 852 and line 887 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  405.8  307.2  71.58
2.6  Line 869 and line 887 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  405.8  307.2  71.58
2.6  Line 898 and line 924 have the same coordinates.  (second line removed)
     A      X, Y, Z:  392.79  307.11  74.46
2.6  Line 927 and line 968 have the same coordinates.  (second line removed)
     A      X, Y, Z:  389.19  307.22  75.74
2.6  Line 928 and line 953 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  388.03  307.47  75.08
2.6  Line 970 and line 1149 have the same coordinates.  (second line removed)
     A      X, Y, Z:  386.88  307.4  76.63
2.6  Line 980 and line 1041 have the same coordinates.  (second line removed)
     A      X, Y, Z:  378.58  316.99  75.52
2.6  Line 981 and line 1021 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  377.8  318.25  76.19
2.6  Line 1051 and line 1079 have the same coordinates.  (second line removed)
     A      X, Y, Z:  367.95  324.36  73.47
2.6  Line 1153 and line 1277 have the same coordinates.  (second line removed)
     A      X, Y, Z:  382.43  307.32  78.5
2.6  Line 1165 and line 1192 have the same coordinates.  (second line removed)
     A      X, Y, Z:  371.65  308.03  70.45
2.6  Line 1203 and line 1226 have the same coordinates.  (second line removed)
     A      X, Y, Z:  364.97  306.29  61.25
2.6  Line 1282 and line 1329 have the same coordinates.  (second line removed)
     A      X, Y, Z:  376.36  307.36  80.14
2.6  Line 1332 and line 1348 have the same coordinates.  (second line removed)
     A      X, Y, Z:  372.47  307.31  80.96
2.6  Line 1351 and line 1551 have the same coordinates.  (second line removed)
     A      X, Y, Z:  368.69  307.35  81.94
2.6  Line 1352 and line 1373 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  367.8  307.27  81.32
2.6  Line 1390 and line 1519 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  347.64  296.63  75.57
2.6  Line 1391 and line 1401 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  346.86  295.8  75.09
2.6  Line 1413 and line 1433 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  339.34  291.98  70.1
2.6  Line 1440 and line 1472 have the same coordinates.  (second line removed)
     A      X, Y, Z:  333.4  287.6  68.58
2.6  Line 1441 and line 1457 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  332.0  286.37  69.48
2.6  Line 1509 and line 1515 have the same coordinates.  (second line removed)
     A      X, Y, Z:  296.85  259.33  64.55
2.6  Line 1558 and line 1575 have the same coordinates.  (second line removed)
     A      X, Y, Z:  359.98  308.25  84.5
2.6  Line 1584 and line 1603 have the same coordinates.  (second line removed)
     A      X, Y, Z:  349.54  309.3  87.75
2.6  Line 1605 and line 1648 have the same coordinates.  (second line removed)
     A      X, Y, Z:  347.02  309.57  88.16
2.6  Line 1659 and line 1698 have the same coordinates.  (second line removed)
     A      X, Y, Z:  334.02  310.88  92.01
2.6  Line 1701 and line 1745 have the same coordinates.  (second line removed)
     A      X, Y, Z:  330.23  311.84  92.61
2.6  Line 1748 and line 1781 have the same coordinates.  (second line removed)
     A      X, Y, Z:  327.03  312.72  94.11
2.6  Line 1797 and line 1824 have the same coordinates.  (second line removed)
     A      X, Y, Z:  307.29  315.35  98.17
2.6  Line 1840 and line 1861 have the same coordinates.  (second line removed)
     A      X, Y, Z:  288.17  316.62  103.37
2.6  Line 1879 and line 1898 have the same coordinates.  (second line removed)
     A      X, Y, Z:  267.38  308.63  109.15
2.6  Line 1905 and line 1924 have the same coordinates.  (second line removed)
     A      X, Y, Z:  259.2  308.84  112.86
2.6  Line 1968 and line 1983 have the same coordinates.  (second line removed)
     A      X, Y, Z:  206.51  314.15  128.28
2.6  Line 2014 and line 2018 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.58  316.86  134.33
2.6  Line 2049 and line 2052 have the same coordinates.  (second line removed)
     A      X, Y, Z:  419.99  302.87  68.37
2.6  Line 2058 and line 2059 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2058 and line 2084 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2058 and line 2309 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2059 and line 2084 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2059 and line 2309 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2084 and line 2309 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  418.4  303.05  73.94
2.6  Line 2088 and line 2107 have the same coordinates.  (second line removed)
     A      X, Y, Z:  417.33  303.39  77.09
2.6  Line 2132 and line 2148 have the same coordinates.  (second line removed)
     A      X, Y, Z:  400.85  311.03  95.43
2.6  Line 2189 and line 2267 have the same coordinates.  (second line removed)
     A      X, Y, Z:  365.98  322.94  124.56
2.6  Line 2316 and line 2334 have the same coordinates.  (second line removed)
     A      X, Y, Z:  416.0  302.47  79.96
2.6  Line 2353 and line 2409 have the same coordinates.  (second line removed)
     A      X, Y, Z:  398.14  295.77  90.78
2.6  Line 2359 and line 2381 have the same coordinates.  (second line removed)
     A      X, Y, Z:  392.19  291.51  89.57
2.6  Line 2415 and line 2497 have the same coordinates.  (second line removed)
     A      X, Y, Z:  394.21  294.2  96.44
2.6  Line 2430 and line 2447 have the same coordinates.  (second line removed)
     A      X, Y, Z:  384.39  278.82  97.1
2.6  Line 2530 and line 2620 have the same coordinates.  (second line removed)
     A      X, Y, Z:  364.75  296.33  120.25
2.6  Line 2559 and line 2571 have the same coordinates.  (second line removed)
     A      X, Y, Z:  332.73  306.76  132.53
2.6  Line 2674 and line 2706 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  402.15  343.81  79.57
2.6  Line 2712 and line 2738 have the same coordinates.  (second line removed)
     A      X, Y, Z:  399.27  349.26  80.95
2.6  Line 2769 and line 2785 have the same coordinates.  (second line removed)
     A      X, Y, Z:  416.63  304.39  68.11
2.6  Line 2814 and line 2827 have the same coordinates.  (second line removed)
     A      X, Y, Z:  418.41  303.41  49.73
4.4  Line 43 of rad 5.3058 links to 42 of rad 1.5.  (no action taken)
     B1      X, Y, Z:  463.1  286.55  19.62
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  475.51  280.28  2.02
 
 


Number of type A irregularities = 52
Number of type B1 irregularities = 69
Number of type B2 irregularities = 0
Number of type C irregularities = 0
