# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_2.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_2.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 2.72257 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.21  162.79  3.54
4.5  Radius of terminal line 5 at 3.17882 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.27  162.7  4.84
4.3  Radius of line 6 at 3.17882 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.27  162.7  4.84
4.3  Radius of line 7 at 3.20007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.76  161.19  5.45
4.3  Radius of line 8 at 3.10514 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.91  159.94  5.56
4.3  Radius of line 9 at 2.66904 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.78  158.89  5.3
4.3  Radius of line 18 at 3.20007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.5  156.72  4.48
4.3  Radius of line 19 at 3.20007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.57  157.84  4.72
4.3  Radius of line 20 at 3.20007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.63  158.95  4.97
4.3  Radius of line 21 at 3.20007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.76  161.19  5.45
4.3  Radius of line 22 at 3.00089 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.7  160.63  5.92
4.3  Radius of line 23 at 2.65111 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.34  159.83  6.05
4.3  Radius of line 1059 at 3.17882 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.27  162.7  4.84
4.3  Radius of line 1060 at 3.2083 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.37  162.8  5.98
4.3  Radius of line 1061 at 3.25788 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.4  163.18  7.01
4.3  Radius of line 1062 at 3.34348 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.3  163.77  7.82
4.3  Radius of line 1063 at 3.38402 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  212.07  164.48  8.42
4.3  Radius of line 1064 at 3.30963 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.83  165.21  8.94
4.3  Radius of line 1065 at 3.26526 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.62  165.86  9.51
4.3  Radius of line 1066 at 3.26759 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.4  166.43  10.18
4.3  Radius of line 1067 at 3.17914 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.21  166.96  10.91
4.3  Radius of line 1068 at 3.06326 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.08  167.51  11.67
4.3  Radius of line 1069 at 2.97795 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.99  168.09  12.43
4.3  Radius of line 1070 at 2.89286 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.93  168.71  13.19
4.3  Radius of line 1071 at 2.82492 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.92  169.34  13.95
4.3  Radius of line 1072 at 2.73906 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.96  169.96  14.7
4.3  Radius of line 1073 at 2.58345 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.05  170.58  15.44
4.3  Radius of line 1074 at 2.40593 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.17  171.21  16.15
2.4  Seg length ending at pt. 73 >= 6.0 stdevs above mean at 24.395.  (no action taken)
     B1      X, Y, Z:  193.87  144.18  12.39
2.4  Seg length ending at pt. 693 >= 6.0 stdevs above mean at 23.8096.  (no action taken)
     B1      X, Y, Z:  193.87  144.18  12.39
2.4  Seg length ending at pt. 1124 >= 6.0 stdevs above mean at 25.3955.  (no action taken)
     B1      X, Y, Z:  210.49  179.39  20.06
2.4  Seg length ending at pt. 1152 >= 6.0 stdevs above mean at 28.4119.  (no action taken)
     B1      X, Y, Z:  202.35  203.54  23.52
2.4  Seg length ending at pt. 1234 >= 6.0 stdevs above mean at 19.1186.  (no action taken)
     B1      X, Y, Z:  217.78  187.44  35.1
2.4  Seg length ending at pt. 1249 >= 6.0 stdevs above mean at 18.5512.  (no action taken)
     B1      X, Y, Z:  217.78  187.44  35.1
2.4  Seg length ending at pt. 1316 >= 6.0 stdevs above mean at 24.3991.  (no action taken)
     B1      X, Y, Z:  222.63  196.9  43.46
2.4  Seg length ending at pt. 1341 >= 6.0 stdevs above mean at 24.8227.  (no action taken)
     B1      X, Y, Z:  232.58  216.94  54.21
2.5  Seg length ending at pt. 1591 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  260.27  261.91  74.99
2.5  Seg length ending at pt. 1593 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  260.27  261.91  74.99
2.7  Line 1592 of rad 1.31693 is an included side branch.  (removed)
     A      X, Y, Z:  261.02  262.18  75.28
2.6  Line 5 and line 6 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  212.27  162.7  4.84
2.6  Line 5 and line 1059 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  212.27  162.7  4.84
2.6  Line 6 and line 1060 have the same coordinates.  (second line removed)
     A      X, Y, Z:  212.27  162.7  4.84
2.6  Line 7 and line 21 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  212.76  161.19  5.45
2.6  Line 55 and line 73 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  193.87  144.18  12.39
2.6  Line 55 and line 693 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  193.87  144.18  12.39
2.6  Line 56 and line 876 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  212.25  152.25  3.52
2.6  Line 73 and line 693 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  193.87  144.18  12.39
2.6  Line 100 and line 388 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.9  126.13  18.65
2.6  Line 149 and line 229 have the same coordinates.  (second line removed)
     A      X, Y, Z:  152.09  104.93  17.38
2.6  Line 249 and line 298 have the same coordinates.  (second line removed)
     A      X, Y, Z:  138.41  98.49  23.15
2.6  Line 311 and line 338 have the same coordinates.  (second line removed)
     A      X, Y, Z:  129.14  92.9  26.45
2.6  Line 399 and line 448 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.79  119.36  23.09
2.6  Line 404 and line 419 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.03  116.34  26.03
2.6  Line 454 and line 538 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.97  115.22  25.05
2.6  Line 590 and line 641 have the same coordinates.  (second line removed)
     A      X, Y, Z:  196.23  78.38  34.33
2.6  Line 664 and line 687 have the same coordinates.  (second line removed)
     A      X, Y, Z:  197.02  60.23  36.62
2.6  Line 727 and line 820 have the same coordinates.  (second line removed)
     A      X, Y, Z:  168.61  146.21  8.27
2.6  Line 749 and line 774 have the same coordinates.  (second line removed)
     A      X, Y, Z:  158.5  136.37  6.27
2.6  Line 967 and line 983 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.92  90.37  32.46
2.6  Line 985 and line 1043 have the same coordinates.  (second line removed)
     A      X, Y, Z:  208.23  89.31  33.14
2.6  Line 1079 and line 2276 have the same coordinates.  (second line removed)
     A      X, Y, Z:  211.96  173.71  18.74
2.6  Line 1080 and line 1127 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  212.19  174.34  19.33
2.6  Line 1151 and line 1234 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  217.78  187.44  35.1
2.6  Line 1151 and line 1249 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  217.78  187.44  35.1
2.6  Line 1152 and line 2206 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  202.35  203.54  23.52
2.6  Line 1184 and line 1205 have the same coordinates.  (second line removed)
     A      X, Y, Z:  204.6  226.03  34.9
2.6  Line 1234 and line 1249 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  217.78  187.44  35.1
2.6  Line 1256 and line 1275 have the same coordinates.  (second line removed)
     A      X, Y, Z:  219.47  190.45  39.12
2.6  Line 1278 and line 2159 have the same coordinates.  (second line removed)
     A      X, Y, Z:  220.31  192.28  40.79
2.6  Line 1279 and line 1317 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  220.63  192.87  41.3
2.6  Line 1341 and line 1414 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.58  216.94  54.21
2.6  Line 1372 and line 1395 have the same coordinates.  (second line removed)
     A      X, Y, Z:  248.27  218.66  74.74
2.6  Line 1436 and line 1439 have the same coordinates.  (second line removed)
     A      X, Y, Z:  239.25  232.13  60.01
2.6  Line 1446 and line 1548 have the same coordinates.  (second line removed)
     A      X, Y, Z:  241.61  236.66  62.16
2.6  Line 1449 and line 1490 have the same coordinates.  (second line removed)
     A      X, Y, Z:  240.82  238.55  63.23
2.6  Line 1585 and line 1959 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.88  260.48  73.85
2.6  Line 1651 and line 1654 have the same coordinates.  (second line removed)
     A      X, Y, Z:  273.05  272.97  82.41
2.6  Line 1679 and line 1789 have the same coordinates.  (second line removed)
     A      X, Y, Z:  287.51  283.4  92.47
2.6  Line 1777 and line 1782 have the same coordinates.  (second line removed)
     A      X, Y, Z:  313.83  350.6  116.24
2.6  Line 1841 and line 1845 have the same coordinates.  (second line removed)
     A      X, Y, Z:  323.87  302.0  93.06
2.6  Line 1869 and line 1872 have the same coordinates.  (second line removed)
     A      X, Y, Z:  341.91  308.48  94.98
2.6  Line 1897 and line 1900 have the same coordinates.  (second line removed)
     A      X, Y, Z:  359.31  317.7  98.26
2.6  Line 1902 and line 1956 have the same coordinates.  (second line removed)
     A      X, Y, Z:  360.91  318.66  98.42
2.6  Line 1974 and line 2025 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.08  272.81  75.67
2.6  Line 2319 and line 2446 have the same coordinates.  (second line removed)
     A      X, Y, Z:  242.83  183.14  24.5
2.6  Line 2322 and line 2365 have the same coordinates.  (second line removed)
     A      X, Y, Z:  244.2  183.51  25.0
2.6  Line 2456 and line 2475 have the same coordinates.  (second line removed)
     A      X, Y, Z:  250.02  182.39  21.73
2.6  Line 2504 and line 2589 have the same coordinates.  (second line removed)
     A      X, Y, Z:  269.43  175.16  13.08
4.4  Line 18 of rad 3.20007 links to 17 of rad 1.2454.  (no action taken)
     B1      X, Y, Z:  212.5  156.72  4.48
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  212.21  162.95  2.0
 
 


Number of type A irregularities = 38
Number of type B1 irregularities = 52
Number of type B2 irregularities = 0
Number of type C irregularities = 0
