# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_11.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Mb_Cell_11.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.5  Radius of terminal line 4 at 4.67184 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
4.3  Radius of line 5 at 4.67184 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
4.3  Radius of line 6 at 3.79136 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  300.71  115.88  232.28
4.3  Radius of line 7 at 2.81264 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  299.58  116.2  232.65
4.3  Radius of line 62 at 4.67184 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
4.5  Radius of terminal line 63 at 4.66057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.25  115.56  230.19
4.3  Radius of line 64 at 4.66057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.25  115.56  230.19
4.3  Radius of line 65 at 4.58601 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.24  115.68  229.06
4.3  Radius of line 66 at 4.45846 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.24  115.8  227.97
4.3  Radius of line 67 at 4.28125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.22  115.87  226.93
4.3  Radius of line 68 at 4.06448 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.18  115.92  225.91
4.3  Radius of line 69 at 3.85194 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.14  115.97  224.9
4.3  Radius of line 70 at 3.72312 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.09  116.02  223.9
4.3  Radius of line 71 at 3.6801 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.02  116.08  222.91
4.3  Radius of line 72 at 3.65518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.99  116.1  222.41
4.3  Radius of line 73 at 4.66057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.1  115.84  226.05
4.3  Radius of line 74 at 4.66057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.25  115.56  230.19
4.3  Radius of line 75 at 4.5046 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.66  115.24  230.07
4.3  Radius of line 76 at 4.02262 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  300.97  114.94  229.57
4.3  Radius of line 77 at 3.23695 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  300.18  114.62  229.05
4.3  Radius of line 158 at 3.65518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.95  116.13  221.91
4.3  Radius of line 159 at 3.49047 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.85  116.17  220.91
4.3  Radius of line 160 at 3.35951 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.74  116.21  219.9
4.3  Radius of line 161 at 3.24202 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.59  116.25  218.89
4.3  Radius of line 162 at 3.10882 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.39  116.28  217.88
4.3  Radius of line 163 at 2.8744 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.13  116.31  216.88
4.3  Radius of line 184 at 3.49047 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  296.09  118.91  211.9
4.3  Radius of line 185 at 3.49047 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.85  116.17  220.91
4.3  Radius of line 186 at 3.42742 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.58  115.46  220.05
4.3  Radius of line 187 at 3.04921 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.31  114.86  219.27
4.3  Radius of line 3817 at 3.65518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.95  116.13  221.91
4.3  Radius of line 3818 at 3.52343 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.11  116.26  220.31
4.3  Radius of line 3819 at 3.44023 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.28  116.41  219.13
4.3  Radius of line 3820 at 3.30762 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.51  116.62  218.2
4.3  Radius of line 3821 at 3.01518 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  302.85  116.93  217.33
2.4  Seg length ending at pt. 62 >= 6.0 stdevs above mean at 45.3883.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
2.5  Seg length ending at pt. 816 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  261.43  130.22  165.43
2.5  Seg length ending at pt. 890 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  261.43  130.22  165.43
2.4  Seg length ending at pt. 1569 >= 6.0 stdevs above mean at 66.5007.  (no action taken)
     B1      X, Y, Z:  316.11  184.9  53.32
2.4  Seg length ending at pt. 2737 >= 6.0 stdevs above mean at 100.9904.  (no action taken)
     B1      X, Y, Z:  249.28  210.62  129.34
2.4  Seg length ending at pt. 2786 >= 6.0 stdevs above mean at 35.2069.  (no action taken)
     B1      X, Y, Z:  232.93  219.33  99.19
2.4  Seg length ending at pt. 2799 >= 6.0 stdevs above mean at 35.3866.  (no action taken)
     B1      X, Y, Z:  232.93  219.33  99.19
2.5  Seg length ending at pt. 2928 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  268.33  139.84  186.26
2.5  Seg length ending at pt. 2945 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  268.33  139.84  186.26
2.5  Seg length ending at pt. 3188 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  174.6  174.49  130.57
2.5  Seg length ending at pt. 3207 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  174.6  174.49  130.57
2.7  Line 63 of rad 4.66057 is an included side branch.  (removed)
     A      X, Y, Z:  302.25  115.56  230.19
2.6  Line 4 and line 6 have the same coordinates.  (second line removed)
     A      X, Y, Z:  302.29  115.59  231.46
2.6  Line 4 and line 62 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
2.6  Line 64 and line 74 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  302.25  115.56  230.19
2.6  Line 158 and line 3817 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  301.95  116.13  221.91
2.6  Line 159 and line 185 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  301.85  116.17  220.91
2.6  Line 288 and line 2081 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  290.33  121.65  202.9
2.6  Line 293 and line 512 have the same coordinates.  (second line removed)
     A      X, Y, Z:  288.99  121.21  198.74
2.6  Line 308 and line 376 have the same coordinates.  (second line removed)
     A      X, Y, Z:  289.06  119.71  185.65
2.6  Line 309 and line 315 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  289.57  120.3  184.87
2.6  Line 337 and line 354 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  290.11  121.68  181.31
2.6  Line 376 and line 387 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  288.91  119.37  184.68
2.6  Line 393 and line 413 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  288.43  114.67  180.38
2.6  Line 393 and line 428 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  288.43  114.67  180.38
2.6  Line 394 and line 449 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  287.86  116.03  179.35
2.6  Line 413 and line 428 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  288.43  114.67  180.38
2.6  Line 527 and line 647 have the same coordinates.  (second line removed)
     A      X, Y, Z:  280.7  119.07  188.77
2.6  Line 530 and line 560 have the same coordinates.  (second line removed)
     A      X, Y, Z:  279.29  118.46  187.9
2.6  Line 574 and line 602 have the same coordinates.  (second line removed)
     A      X, Y, Z:  275.23  108.66  191.23
2.6  Line 653 and line 767 have the same coordinates.  (second line removed)
     A      X, Y, Z:  279.04  118.8  183.32
2.6  Line 658 and line 677 have the same coordinates.  (second line removed)
     A      X, Y, Z:  279.64  118.9  179.54
2.6  Line 688 and line 708 have the same coordinates.  (second line removed)
     A      X, Y, Z:  284.54  115.92  171.73
2.6  Line 773 and line 790 have the same coordinates.  (second line removed)
     A      X, Y, Z:  275.99  120.63  178.67
2.6  Line 834 and line 856 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.45  117.99  163.82
2.6  Line 928 and line 1948 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.27  136.63  155.49
2.6  Line 938 and line 1901 have the same coordinates.  (second line removed)
     A      X, Y, Z:  253.87  140.16  147.35
2.6  Line 939 and line 959 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  254.14  140.44  146.47
2.6  Line 1006 and line 1342 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  257.18  144.38  129.93
2.6  Line 1056 and line 1167 have the same coordinates.  (second line removed)
     A      X, Y, Z:  246.35  127.26  99.61
2.6  Line 1390 and line 1597 have the same coordinates.  (second line removed)
     A      X, Y, Z:  262.92  165.91  98.31
2.6  Line 1481 and line 1583 have the same coordinates.  (second line removed)
     A      X, Y, Z:  315.34  184.9  53.47
2.6  Line 1482 and line 1569 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  316.11  184.9  53.32
2.6  Line 1659 and line 1761 have the same coordinates.  (second line removed)
     A      X, Y, Z:  258.12  208.05  75.02
2.6  Line 1905 and line 1920 have the same coordinates.  (second line removed)
     A      X, Y, Z:  252.69  140.13  143.48
2.6  Line 1971 and line 1989 have the same coordinates.  (second line removed)
     A      X, Y, Z:  237.52  144.71  150.88
2.6  Line 2108 and line 2913 have the same coordinates.  (second line removed)
     A      X, Y, Z:  279.01  137.13  191.71
2.6  Line 2120 and line 2171 have the same coordinates.  (second line removed)
     A      X, Y, Z:  278.65  144.88  185.47
2.6  Line 2173 and line 2233 have the same coordinates.  (second line removed)
     A      X, Y, Z:  278.18  146.14  184.29
2.6  Line 2244 and line 2304 have the same coordinates.  (second line removed)
     A      X, Y, Z:  275.68  152.08  176.98
2.6  Line 2340 and line 2384 have the same coordinates.  (second line removed)
     A      X, Y, Z:  261.86  173.77  160.5
2.6  Line 2398 and line 2425 have the same coordinates.  (second line removed)
     A      X, Y, Z:  259.29  181.81  151.96
2.6  Line 2434 and line 2449 have the same coordinates.  (second line removed)
     A      X, Y, Z:  259.36  187.78  147.46
2.6  Line 2462 and line 2515 have the same coordinates.  (second line removed)
     A      X, Y, Z:  257.65  197.15  142.21
2.6  Line 2526 and line 2591 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.52  203.86  136.4
2.6  Line 2603 and line 2892 have the same coordinates.  (second line removed)
     A      X, Y, Z:  249.57  210.06  130.06
2.6  Line 2604 and line 2737 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  249.28  210.62  129.34
2.6  Line 2785 and line 2786 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.93  219.33  99.19
2.6  Line 2785 and line 2799 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.93  219.33  99.19
2.6  Line 2786 and line 2799 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  232.93  219.33  99.19
2.6  Line 2992 and line 3009 have the same coordinates.  (second line removed)
     A      X, Y, Z:  255.93  142.56  176.01
2.6  Line 3012 and line 3029 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.04  142.69  174.15
2.6  Line 3079 and line 3102 have the same coordinates.  (second line removed)
     A      X, Y, Z:  221.42  153.26  149.41
2.6  Line 3136 and line 3153 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.44  165.98  135.68
2.6  Line 3244 and line 3265 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.84  201.82  120.49
2.6  Line 3279 and line 3297 have the same coordinates.  (second line removed)
     A      X, Y, Z:  177.11  212.37  115.99
2.6  Line 3462 and line 3599 have the same coordinates.  (second line removed)
     A      X, Y, Z:  171.74  174.95  129.73
2.6  Line 3848 and line 4031 have the same coordinates.  (second line removed)
     A      X, Y, Z:  317.74  130.8  211.69
2.6  Line 3854 and line 3904 have the same coordinates.  (second line removed)
     A      X, Y, Z:  319.7  133.95  210.46
2.6  Line 3908 and line 3962 have the same coordinates.  (second line removed)
     A      X, Y, Z:  321.26  136.31  208.84
4.4  Line 62 of rad 4.67184 links to 61 of rad 1.2454.  (no action taken)
     B1      X, Y, Z:  302.29  115.59  231.46
4.4  Line 184 of rad 3.49047 links to 183 of rad 1.45984.  (no action taken)
     B1      X, Y, Z:  296.09  118.91  211.9
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  302.34  115.83  232.97
 
 


Number of type A irregularities = 46
Number of type B1 irregularities = 62
Number of type B2 irregularities = 0
Number of type C irregularities = 0
