# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Ma_Cell_1.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_Ma_Cell_1.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 4.21071 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  380.19  361.3  200.44
4.3  Radius of line 5 at 4.27705 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  380.23  361.91  199.15
4.3  Radius of line 6 at 4.2408 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  380.01  362.19  197.81
4.3  Radius of line 7 at 4.11835 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  379.79  362.38  196.54
4.3  Radius of line 8 at 3.90464 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  379.55  362.58  195.38
4.3  Radius of line 9 at 3.63921 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  379.24  362.79  194.27
4.3  Radius of line 10 at 3.35162 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  378.88  363.02  193.2
4.3  Radius of line 11 at 2.97358 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  378.44  363.29  192.16
4.3  Radius of line 12 at 2.45166 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  377.95  363.57  191.13
4.5  Radius of terminal line 19 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  373.17  366.33  184.86
4.5  Radius of terminal line 87 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  421.33  375.17  150.85
4.5  Radius of terminal line 135 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  397.02  414.01  168.89
4.5  Radius of terminal line 176 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  384.03  408.75  142.68
4.5  Radius of terminal line 220 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  389.17  425.55  132.59
4.5  Radius of terminal line 285 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  315.95  405.79  163.66
4.5  Radius of terminal line 349 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  293.65  370.14  176.57
4.5  Radius of terminal line 383 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  300.01  393.7  166.16
4.5  Radius of terminal line 438 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  292.75  328.61  174.9
4.5  Radius of terminal line 473 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  312.17  313.0  152.24
4.5  Radius of terminal line 518 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  289.95  396.49  152.7
4.5  Radius of terminal line 554 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.75  371.92  138.82
4.5  Radius of terminal line 624 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  204.44  361.89  131.46
4.5  Radius of terminal line 658 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  278.96  356.24  118.29
4.5  Radius of terminal line 688 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  265.13  342.25  124.17
4.5  Radius of terminal line 716 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  263.85  363.27  132.91
4.5  Radius of terminal line 773 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  249.72  396.51  94.44
4.5  Radius of terminal line 847 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.73  375.7  102.79
4.5  Radius of terminal line 869 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  253.77  406.08  130.57
4.5  Radius of terminal line 922 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.74  397.87  131.76
4.5  Radius of terminal line 964 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  220.14  408.7  128.79
4.5  Radius of terminal line 1088 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.21  497.19  46.61
4.5  Radius of terminal line 1185 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.7  421.25  87.66
4.5  Radius of terminal line 1313 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.68  478.01  76.49
4.5  Radius of terminal line 1430 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.2  476.54  98.7
4.5  Radius of terminal line 1570 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.83  379.66  84.66
4.5  Radius of terminal line 1588 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.86  414.85  89.05
4.5  Radius of terminal line 1682 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.77  360.67  31.25
4.5  Radius of terminal line 1699 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  301.21  396.79  135.97
4.5  Radius of terminal line 1743 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  312.26  329.07  152.17
4.5  Radius of terminal line 1801 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  359.08  394.92  116.72
4.5  Radius of terminal line 1806 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  344.65  379.32  154.3
4.5  Radius of terminal line 1845 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  333.11  367.4  127.81
4.5  Radius of terminal line 1913 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  334.4  443.44  109.06
4.5  Radius of terminal line 1966 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.11  385.36  107.47
4.5  Radius of terminal line 1991 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  292.34  367.96  123.06
4.5  Radius of terminal line 2049 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  291.93  394.98  87.41
4.5  Radius of terminal line 2197 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  351.97  416.93  7.73
4.5  Radius of terminal line 2247 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  266.47  418.74  111.34
4.5  Radius of terminal line 2291 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  274.55  442.45  123.67
4.5  Radius of terminal line 2340 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  305.24  452.03  100.43
4.5  Radius of terminal line 2384 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  292.72  461.86  109.36
4.5  Radius of terminal line 2442 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  238.56  431.36  85.22
4.5  Radius of terminal line 2564 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
4.5  Radius of terminal line 2576 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  270.46  478.15  49.05
4.5  Radius of terminal line 2650 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  180.76  414.37  2.63
4.5  Radius of terminal line 2679 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  159.89  397.86  6.05
4.5  Radius of terminal line 2744 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  230.25  340.85  12.18
4.5  Radius of terminal line 2783 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  255.63  438.7  1.1
4.5  Radius of terminal line 2860 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.36  507.28  8.04
4.5  Radius of terminal line 2946 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  202.8  497.47  25.19
4.5  Radius of terminal line 2997 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  194.22  458.72  0.5
4.5  Radius of terminal line 3005 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  225.5  531.97  11.61
4.5  Radius of terminal line 3109 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.55  482.26  47.86
4.5  Radius of terminal line 3133 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.97  494.72  29.59
4.5  Radius of terminal line 3234 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  123.43  458.81  51.01
4.5  Radius of terminal line 3237 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  133.64  470.73  48.66
4.5  Radius of terminal line 3288 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  176.75  507.42  19.57
4.5  Radius of terminal line 3318 at 1.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  176.84  525.5  40.86
2.4  Seg length ending at pt. 20 >= 6.0 stdevs above mean at 18.9925.  (no action taken)
     B1      X, Y, Z:  373.17  366.33  184.86
2.4  Seg length ending at pt. 221 >= 6.0 stdevs above mean at 18.9925.  (no action taken)
     B1      X, Y, Z:  373.17  366.33  184.86
2.5  Seg length ending at pt. 354 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  333.17  375.82  160.44
2.5  Seg length ending at pt. 384 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  333.17  375.82  160.44
2.5  Seg length ending at pt. 524 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  304.59  379.34  145.48
2.4  Seg length ending at pt. 555 >= 6.0 stdevs above mean at 15.4744.  (no action taken)
     B1      X, Y, Z:  287.55  384.9  137.52
2.4  Seg length ending at pt. 1556 >= 6.0 stdevs above mean at 56.9175.  (no action taken)
     B1      X, Y, Z:  57.54  394.27  83.9
2.5  Seg length ending at pt. 1683 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  304.59  379.34  145.48
2.5  Seg length ending at pt. 1751 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  345.23  378.96  158.5
2.5  Seg length ending at pt. 1802 <= 0.1 at 0.06.  (removed)
     A       X, Y, Z:  345.23  378.96  158.5
2.4  Seg length ending at pt. 2510 >= 6.0 stdevs above mean at 19.6714.  (no action taken)
     B1      X, Y, Z:  268.82  460.72  70.71
2.4  Seg length ending at pt. 2565 >= 6.0 stdevs above mean at 23.9127.  (no action taken)
     B1      X, Y, Z:  264.91  477.45  59.94
2.4  Seg length ending at pt. 2577 >= 6.0 stdevs above mean at 53.6531.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
2.4  Seg length ending at pt. 2745 >= 6.0 stdevs above mean at 53.7564.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
2.4  Seg length ending at pt. 3223 >= 6.0 stdevs above mean at 41.9246.  (no action taken)
     B1      X, Y, Z:  133.82  470.1  50.27
2.6  Line 19 and line 20 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  373.17  366.33  184.86
2.6  Line 19 and line 221 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  373.17  366.33  184.86
2.6  Line 20 and line 222 have the same coordinates.  (second line removed)
     A      X, Y, Z:  373.17  366.33  184.86
2.6  Line 23 and line 89 have the same coordinates.  (second line removed)
     A      X, Y, Z:  371.87  367.37  182.96
2.6  Line 105 and line 137 have the same coordinates.  (second line removed)
     A      X, Y, Z:  376.61  380.74  173.07
2.6  Line 154 and line 178 have the same coordinates.  (second line removed)
     A      X, Y, Z:  383.03  393.06  159.93
2.6  Line 238 and line 287 have the same coordinates.  (second line removed)
     A      X, Y, Z:  359.5  375.23  175.08
2.6  Line 302 and line 1745 have the same coordinates.  (second line removed)
     A      X, Y, Z:  346.97  377.33  163.44
2.6  Line 312 and line 351 have the same coordinates.  (second line removed)
     A      X, Y, Z:  335.53  375.55  161.45
2.6  Line 403 and line 440 have the same coordinates.  (second line removed)
     A      X, Y, Z:  324.92  352.95  163.01
2.6  Line 498 and line 520 have the same coordinates.  (second line removed)
     A      X, Y, Z:  307.78  379.45  147.44
2.6  Line 525 and line 544 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  303.48  379.22  144.97
2.6  Line 554 and line 625 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  294.75  371.92  138.82
2.6  Line 554 and line 689 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  294.75  371.92  138.82
2.6  Line 555 and line 717 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  287.55  384.9  137.52
2.6  Line 625 and line 689 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  294.75  371.92  138.82
2.6  Line 633 and line 660 have the same coordinates.  (second line removed)
     A      X, Y, Z:  290.12  365.5  134.88
2.6  Line 723 and line 775 have the same coordinates.  (second line removed)
     A      X, Y, Z:  282.82  387.07  133.94
2.6  Line 784 and line 849 have the same coordinates.  (second line removed)
     A      X, Y, Z:  272.09  390.64  130.75
2.6  Line 856 and line 871 have the same coordinates.  (second line removed)
     A      X, Y, Z:  264.51  394.73  128.11
2.6  Line 880 and line 924 have the same coordinates.  (second line removed)
     A      X, Y, Z:  254.41  397.45  124.11
2.6  Line 951 and line 966 have the same coordinates.  (second line removed)
     A      X, Y, Z:  222.4  407.46  114.09
2.6  Line 994 and line 1187 have the same coordinates.  (second line removed)
     A      X, Y, Z:  194.64  421.99  103.53
2.6  Line 1037 and line 1090 have the same coordinates.  (second line removed)
     A      X, Y, Z:  167.5  456.09  80.71
2.6  Line 1208 and line 1315 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.99  422.08  104.4
2.6  Line 1336 and line 1432 have the same coordinates.  (second line removed)
     A      X, Y, Z:  142.92  414.07  99.49
2.6  Line 1464 and line 1590 have the same coordinates.  (second line removed)
     A      X, Y, Z:  103.98  401.64  94.51
2.6  Line 1505 and line 1572 have the same coordinates.  (second line removed)
     A      X, Y, Z:  58.82  393.95  83.85
2.6  Line 1506 and line 1556 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.54  394.27  83.9
2.6  Line 1817 and line 1847 have the same coordinates.  (second line removed)
     A      X, Y, Z:  337.39  381.71  151.88
2.6  Line 1855 and line 1915 have the same coordinates.  (second line removed)
     A      X, Y, Z:  331.71  385.4  145.66
2.6  Line 1924 and line 2051 have the same coordinates.  (second line removed)
     A      X, Y, Z:  325.11  390.49  138.68
2.6  Line 1927 and line 1993 have the same coordinates.  (second line removed)
     A      X, Y, Z:  323.65  391.3  135.85
2.6  Line 1936 and line 1968 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.41  387.72  130.92
2.6  Line 2066 and line 2199 have the same coordinates.  (second line removed)
     A      X, Y, Z:  317.31  401.85  128.71
2.6  Line 2203 and line 2293 have the same coordinates.  (second line removed)
     A      X, Y, Z:  314.2  404.8  126.49
2.6  Line 2213 and line 2249 have the same coordinates.  (second line removed)
     A      X, Y, Z:  302.88  403.49  125.67
2.6  Line 2307 and line 2342 have the same coordinates.  (second line removed)
     A      X, Y, Z:  305.6  416.61  117.89
2.6  Line 2358 and line 2386 have the same coordinates.  (second line removed)
     A      X, Y, Z:  295.3  430.86  109.41
2.6  Line 2393 and line 2444 have the same coordinates.  (second line removed)
     A      X, Y, Z:  291.46  436.83  104.82
2.6  Line 2483 and line 3007 have the same coordinates.  (second line removed)
     A      X, Y, Z:  270.34  455.04  75.47
2.6  Line 2484 and line 2513 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  270.22  454.73  74.58
2.6  Line 2564 and line 2577 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
2.6  Line 2564 and line 2745 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
2.6  Line 2565 and line 2784 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  264.91  477.45  59.94
2.6  Line 2577 and line 2745 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  245.62  427.6  35.29
2.6  Line 2602 and line 2681 have the same coordinates.  (second line removed)
     A      X, Y, Z:  225.86  410.37  26.56
2.6  Line 2633 and line 2652 have the same coordinates.  (second line removed)
     A      X, Y, Z:  188.84  411.47  17.27
2.6  Line 2818 and line 2862 have the same coordinates.  (second line removed)
     A      X, Y, Z:  256.41  512.5  42.78
2.6  Line 2903 and line 2999 have the same coordinates.  (second line removed)
     A      X, Y, Z:  226.29  526.71  17.01
2.6  Line 2932 and line 2948 have the same coordinates.  (second line removed)
     A      X, Y, Z:  215.48  503.28  16.29
2.6  Line 3076 and line 3239 have the same coordinates.  (second line removed)
     A      X, Y, Z:  200.35  497.12  55.98
2.6  Line 3092 and line 3135 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.52  493.67  52.39
2.6  Line 3097 and line 3111 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.4  492.92  47.45
2.6  Line 3178 and line 3236 have the same coordinates.  (second line removed)
     A      X, Y, Z:  134.95  471.35  50.39
2.6  Line 3179 and line 3223 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  133.82  470.1  50.27
2.6  Line 3244 and line 3290 have the same coordinates.  (second line removed)
     A      X, Y, Z:  195.71  501.27  53.23
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  379.76  360.27  201.61
 
 


Number of type A irregularities = 49
Number of type B1 irregularities = 92
Number of type B2 irregularities = 0
Number of type C irregularities = 0
