# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_B_Cell.imx.swc.swc created with StdSwc version 1.31 on 4/25/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Mouse_CA2_B_Cell.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 2.40002 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.43  255.16  5.48
4.3  Radius of line 74 at 3.04612 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
4.3  Radius of line 75 at 3.04612 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
4.3  Radius of line 76 at 3.52088 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  337.29  256.09  6.56
4.3  Radius of line 77 at 3.68056 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  338.17  256.03  7.19
4.3  Radius of line 78 at 3.51523 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  339.13  255.99  7.42
4.3  Radius of line 79 at 3.0946 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  340.06  255.94  7.35
4.3  Radius of line 80 at 2.44548 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  340.92  255.91  7.1
4.3  Radius of line 131 at 3.04612 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
4.3  Radius of line 132 at 3.88173 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.26  256.06  6.73
4.3  Radius of line 133 at 3.88173 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.26  256.06  6.73
4.3  Radius of line 134 at 4.22452 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  335.85  256.03  7.68
4.3  Radius of line 135 at 4.24774 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  335.16  256.14  8.34
4.3  Radius of line 136 at 4.06822 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  334.34  256.37  8.71
4.3  Radius of line 137 at 3.79566 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  333.58  256.65  8.97
4.3  Radius of line 138 at 3.48294 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  332.91  256.95  9.23
4.3  Radius of line 139 at 3.16162 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  332.3  257.26  9.52
4.3  Radius of line 140 at 2.83425 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.7  257.6  9.81
4.3  Radius of line 141 at 2.49969 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.12  257.95  10.09
4.3  Radius of line 204 at 3.88173 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  322.17  262.57  6.93
4.3  Radius of line 205 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  329.36  259.28  7.22
4.3  Radius of line 206 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
4.3  Radius of line 207 at 4.71382 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.72  255.85  8.41
4.3  Radius of line 208 at 4.72444 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.69  255.62  9.34
4.3  Radius of line 209 at 4.18523 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.48  255.29  10.22
4.3  Radius of line 210 at 3.39363 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.19  254.92  11.06
4.3  Radius of line 211 at 2.57812 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  335.92  254.57  11.89
4.3  Radius of line 563 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  326.03  242.27  8.6
4.3  Radius of line 564 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  328.66  245.7  8.32
4.3  Radius of line 565 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  331.29  249.13  8.05
4.3  Radius of line 566 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
4.3  Radius of line 567 at 4.64921 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  337.28  255.89  8.55
4.3  Radius of line 568 at 4.70512 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  338.1  255.83  9.23
4.3  Radius of line 569 at 4.48205 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  338.95  255.78  9.73
4.3  Radius of line 570 at 4.11562 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  339.72  255.73  10.26
4.3  Radius of line 571 at 3.71285 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  340.44  255.7  10.8
4.3  Radius of line 572 at 3.3523 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  341.13  255.71  11.35
4.3  Radius of line 573 at 3.09801 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  341.77  255.75  11.92
4.3  Radius of line 574 at 2.88809 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  342.33  255.81  12.56
4.3  Radius of line 575 at 2.64411 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  342.85  255.9  13.23
4.3  Radius of line 576 at 2.41564 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  343.35  256.0  13.9
4.3  Radius of line 2828 at 2.57119 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  351.27  336.92  156.79
4.3  Radius of line 2829 at 2.924 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  350.82  336.83  157.56
4.3  Radius of line 2830 at 2.80534 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  350.6  336.85  158.43
4.3  Radius of line 4492 at 3.88173 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.26  256.06  6.73
4.3  Radius of line 4493 at 4.33008 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
4.3  Radius of line 5905 at 3.12514 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  335.34  255.94  5.91
4.3  Radius of line 5906 at 3.53542 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  334.22  255.72  6.31
4.3  Radius of line 5907 at 3.16344 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  333.33  255.52  5.96
4.3  Radius of line 5908 at 2.53416 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  332.6  255.29  5.46
4.3  Radius of line 5978 at 2.66485 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  336.09  256.41  5.13
4.3  Radius of line 5979 at 2.66485 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  335.48  256.61  5.87
4.3  Radius of line 5980 at 2.62283 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  334.56  257.18  6.36
2.5  Seg length ending at pt. 73 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  336.7  256.22  4.38
2.4  Seg length ending at pt. 75 >= 6.0 stdevs above mean at 41.8468.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
2.4  Seg length ending at pt. 131 >= 6.0 stdevs above mean at 36.4456.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
2.4  Seg length ending at pt. 204 >= 6.0 stdevs above mean at 31.2741.  (no action taken)
     B1      X, Y, Z:  322.17  262.57  6.93
2.4  Seg length ending at pt. 563 >= 6.0 stdevs above mean at 181.1678.  (no action taken)
     B1      X, Y, Z:  326.03  242.27  8.6
2.4  Seg length ending at pt. 602 >= 6.0 stdevs above mean at 189.8647.  (no action taken)
     B1      X, Y, Z:  215.9  98.82  19.91
2.4  Seg length ending at pt. 621 >= 6.0 stdevs above mean at 36.4254.  (no action taken)
     B1      X, Y, Z:  358.25  261.39  22.64
2.4  Seg length ending at pt. 936 >= 6.0 stdevs above mean at 40.0103.  (no action taken)
     B1      X, Y, Z:  358.25  261.39  22.64
2.4  Seg length ending at pt. 4494 >= 6.0 stdevs above mean at 31.6045.  (no action taken)
     B1      X, Y, Z:  293.48  275.82  7.34
2.5  Seg length ending at pt. 5904 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  336.7  256.22  4.38
2.5  Seg length ending at pt. 5977 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  336.7  256.22  4.38
2.4  Seg length ending at pt. 6067 >= 6.0 stdevs above mean at 51.903.  (no action taken)
     B1      X, Y, Z:  329.58  273.82  3.09
2.7  Line 132 of rad 3.88173 is an included side branch.  (removed)
     A      X, Y, Z:  336.26  256.06  6.73
2.6  Line 74 and line 75 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
2.6  Line 74 and line 131 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
2.6  Line 75 and line 131 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
2.6  Line 133 and line 4492 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.26  256.06  6.73
2.6  Line 206 and line 566 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
2.6  Line 206 and line 4493 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
2.6  Line 566 and line 4493 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  336.55  255.98  7.51
2.6  Line 601 and line 621 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  358.25  261.39  22.64
2.6  Line 601 and line 936 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  358.25  261.39  22.64
2.6  Line 602 and line 4360 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  215.9  98.82  19.91
2.6  Line 621 and line 936 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  358.25  261.39  22.64
2.6  Line 652 and line 828 have the same coordinates.  (second line removed)
     A      X, Y, Z:  373.68  251.33  34.16
2.6  Line 945 and line 2833 have the same coordinates.  (second line removed)
     A      X, Y, Z:  362.5  264.59  24.6
2.6  Line 964 and line 998 have the same coordinates.  (second line removed)
     A      X, Y, Z:  370.58  273.88  25.96
2.6  Line 1055 and line 2356 have the same coordinates.  (second line removed)
     A      X, Y, Z:  387.68  306.72  37.81
2.6  Line 1135 and line 1406 have the same coordinates.  (second line removed)
     A      X, Y, Z:  422.53  348.4  42.35
2.6  Line 1367 and line 1384 have the same coordinates.  (second line removed)
     A      X, Y, Z:  402.93  499.87  37.81
2.6  Line 1452 and line 1822 have the same coordinates.  (second line removed)
     A      X, Y, Z:  446.41  367.92  45.32
2.6  Line 1544 and line 1681 have the same coordinates.  (second line removed)
     A      X, Y, Z:  489.17  410.39  56.87
2.6  Line 1961 and line 2129 have the same coordinates.  (second line removed)
     A      X, Y, Z:  535.87  381.48  37.54
2.6  Line 2058 and line 2095 have the same coordinates.  (second line removed)
     A      X, Y, Z:  593.89  399.05  21.58
2.6  Line 2444 and line 2700 have the same coordinates.  (second line removed)
     A      X, Y, Z:  398.16  355.34  76.81
2.6  Line 2471 and line 2573 have the same coordinates.  (second line removed)
     A      X, Y, Z:  400.82  369.47  89.5
2.6  Line 2874 and line 3523 have the same coordinates.  (second line removed)
     A      X, Y, Z:  387.73  270.5  33.5
2.6  Line 2966 and line 3073 have the same coordinates.  (second line removed)
     A      X, Y, Z:  441.04  293.54  57.7
2.6  Line 3084 and line 3184 have the same coordinates.  (second line removed)
     A      X, Y, Z:  447.53  295.58  61.28
2.6  Line 3338 and line 3418 have the same coordinates.  (second line removed)
     A      X, Y, Z:  546.94  290.6  89.95
2.6  Line 3654 and line 3731 have the same coordinates.  (second line removed)
     A      X, Y, Z:  461.29  231.42  46.46
2.6  Line 3840 and line 3905 have the same coordinates.  (second line removed)
     A      X, Y, Z:  520.16  199.76  52.68
2.6  Line 3929 and line 3994 have the same coordinates.  (second line removed)
     A      X, Y, Z:  530.35  187.4  55.97
2.6  Line 4257 and line 4270 have the same coordinates.  (second line removed)
     A      X, Y, Z:  616.3  112.49  18.72
2.6  Line 4372 and line 4429 have the same coordinates.  (second line removed)
     A      X, Y, Z:  218.78  93.97  22.9
2.6  Line 4494 and line 4520 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  293.48  275.82  7.34
2.6  Line 4550 and line 4598 have the same coordinates.  (second line removed)
     A      X, Y, Z:  280.87  290.53  6.95
2.6  Line 4628 and line 5875 have the same coordinates.  (second line removed)
     A      X, Y, Z:  271.7  308.4  8.8
2.6  Line 4629 and line 4648 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  271.38  308.99  8.83
2.6  Line 4766 and line 5304 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  264.25  317.96  10.54
2.6  Line 4813 and line 4879 have the same coordinates.  (second line removed)
     A      X, Y, Z:  233.75  312.81  9.07
2.6  Line 5114 and line 5220 have the same coordinates.  (second line removed)
     A      X, Y, Z:  96.44  349.46  52.84
2.6  Line 5311 and line 5346 have the same coordinates.  (second line removed)
     A      X, Y, Z:  262.71  321.66  11.49
2.6  Line 5468 and line 5597 have the same coordinates.  (second line removed)
     A      X, Y, Z:  205.11  372.45  28.25
2.6  Line 5781 and line 5804 have the same coordinates.  (second line removed)
     A      X, Y, Z:  115.3  452.15  20.51
2.6  Line 6005 and line 6006 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  329.58  273.82  3.09
2.6  Line 6005 and line 6067 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  329.58  273.82  3.09
2.6  Line 6006 and line 6067 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  329.58  273.82  3.09
2.6  Line 6014 and line 6037 have the same coordinates.  (second line removed)
     A      X, Y, Z:  331.52  278.83  2.46
4.4  Line 75 of rad 3.04612 links to 72 of rad 1.03784.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
4.4  Line 131 of rad 3.04612 links to 130 of rad 1.03784.  (no action taken)
     B1      X, Y, Z:  336.49  256.16  5.59
4.4  Line 204 of rad 3.88173 links to 203 of rad 1.03784.  (no action taken)
     B1      X, Y, Z:  322.17  262.57  6.93
4.4  Line 563 of rad 4.33008 links to 562 of rad 1.03784.  (no action taken)
     B1      X, Y, Z:  326.03  242.27  8.6
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  336.7  256.22  4.38
 
 


Number of type A irregularities = 33
Number of type B1 irregularities = 84
Number of type B2 irregularities = 0
Number of type C irregularities = 0
