# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\SW161129-06A_1_11_40X_Striatum_reconstruction_neuron_2.swc.swc created with StdSwc version 1.31 on 4/6/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\SW161129-06A_1_11_40X_Striatum_reconstruction_neuron_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 46 at 7.63809 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  202.82  619.46  11.68
4.3  Radius of line 47 at 7.80056 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.97  619.67  13.54
4.3  Radius of line 48 at 7.81373 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.72  618.96  17.79
4.3  Radius of line 70 at 7.455 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.56  616.59  11.0
4.3  Radius of line 71 at 6.87918 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  204.74  615.2  10.8
4.3  Radius of line 89 at 7.59734 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.38  616.59  11.0
4.3  Radius of line 90 at 8.17903 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.93  615.24  10.99
4.3  Radius of line 104 at 9.14798 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  214.88  611.27  10.75
4.3  Radius of line 105 at 8.946 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  215.18  610.14  10.65
4.3  Radius of line 106 at 9.12338 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  215.43  611.33  11.13
4.3  Radius of line 107 at 8.449 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  218.56  613.25  12.88
2.5  Seg length ending at pt. 943 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  135.57  354.24  11.28
4.4  Line 12 of rad 1.6967 links to 11 of rad 0.667411.  (no action taken)
     B1      X, Y, Z:  197.19  652.94  7.46
4.4  Line 19 of rad 1.11559 links to 18 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  178.87  679.73  2.93
4.4  Line 25 of rad 1.38023 links to 24 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  178.44  709.26  0.05
4.4  Line 33 of rad 6.08686 links to 32 of rad 2.485.  (no action taken)
     B1      X, Y, Z:  203.07  624.94  10.0
4.4  Line 59 of rad 1.28016 links to 58 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  153.1  583.05  18.67
4.4  Line 64 of rad 1.14529 links to 63 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  131.38  571.18  17.18
4.4  Line 67 of rad 1.491 links to 66 of rad 0.710576.  (no action taken)
     B1      X, Y, Z:  125.8  558.18  15.87
4.4  Line 74 of rad 1.8066 links to 73 of rad 0.529141.  (no action taken)
     B1      X, Y, Z:  193.29  607.42  4.4
4.4  Line 88 of rad 0.994 links to 87 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  135.12  573.1  4.0
4.4  Line 112 of rad 2.485 links to 111 of rad 1.04405.  (no action taken)
     B1      X, Y, Z:  238.58  599.86  15.0
4.4  Line 118 of rad 1.69409 links to 117 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  260.31  579.53  15.42
4.4  Line 130 of rad 1.24891 links to 129 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  245.92  640.87  15.46
4.4  Line 133 of rad 0.994 links to 132 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  236.3  637.6  9.59
4.4  Line 139 of rad 2.485 links to 138 of rad 0.797779.  (no action taken)
     B1      X, Y, Z:  228.3  592.9  3.36
4.4  Line 166 of rad 1.491 links to 165 of rad 0.503451.  (no action taken)
     B1      X, Y, Z:  219.39  713.87  0.0
4.4  Line 170 of rad 1.4577 links to 169 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  207.73  729.67  0.0
4.4  Line 175 of rad 1.24226 links to 174 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  205.13  750.93  0.01
4.4  Line 178 of rad 1.491 links to 177 of rad 0.579577.  (no action taken)
     B1      X, Y, Z:  218.99  747.05  2.0
4.4  Line 200 of rad 2.69271 links to 199 of rad 0.883775.  (no action taken)
     B1      X, Y, Z:  255.61  575.51  0.03
4.4  Line 208 of rad 1.988 links to 207 of rad 0.883179.  (no action taken)
     B1      X, Y, Z:  268.19  572.96  8.67
4.4  Line 241 of rad 1.11087 links to 221 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  303.36  609.18  7.99
4.4  Line 252 of rad 1.37156 links to 251 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  335.9  652.77  6.74
4.4  Line 262 of rad 1.491 links to 261 of rad 0.71321.  (no action taken)
     B1      X, Y, Z:  367.6  690.75  2.86
4.4  Line 291 of rad 1.988 links to 290 of rad 0.625057.  (no action taken)
     B1      X, Y, Z:  365.06  709.38  2.87
4.4  Line 297 of rad 1.31584 links to 296 of rad 0.547818.  (no action taken)
     B1      X, Y, Z:  390.46  700.93  16.97
4.4  Line 301 of rad 2.01891 links to 300 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  365.02  706.1  11.52
4.4  Line 303 of rad 0.994 links to 302 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  371.19  706.67  18.0
4.4  Line 321 of rad 0.994 links to 320 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  315.28  542.04  10.0
4.4  Line 326 of rad 1.68806 links to 325 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  325.81  551.13  10.85
4.4  Line 336 of rad 1.28711 links to 335 of rad 0.610063.  (no action taken)
     B1      X, Y, Z:  315.77  586.77  5.53
4.4  Line 340 of rad 0.994 links to 339 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  316.58  603.58  2.06
4.4  Line 346 of rad 2.485 links to 327 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  333.81  549.59  10.3
4.4  Line 351 of rad 1.39758 links to 350 of rad 0.513585.  (no action taken)
     B1      X, Y, Z:  321.9  543.68  1.15
4.4  Line 375 of rad 2.45474 links to 374 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  346.34  476.71  18.31
4.4  Line 401 of rad 0.994 links to 400 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  314.27  498.33  9.22
4.4  Line 412 of rad 0.994 links to 411 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  274.08  491.41  1.84
4.4  Line 414 of rad 0.994 links to 413 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  278.9  483.04  0.0
4.4  Line 421 of rad 1.07489 links to 420 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  341.02  548.89  10.79
4.4  Line 448 of rad 1.491 links to 447 of rad 0.628745.  (no action taken)
     B1      X, Y, Z:  469.74  516.67  18.23
4.4  Line 457 of rad 1.46356 links to 456 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  342.88  553.18  10.83
4.4  Line 465 of rad 0.994 links to 464 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  375.61  559.34  21.86
4.4  Line 467 of rad 1.988 links to 456 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  345.47  553.3  9.02
4.4  Line 472 of rad 2.982 links to 471 of rad 1.491.  (no action taken)
     B1      X, Y, Z:  361.36  566.63  7.46
4.4  Line 482 of rad 1.24058 links to 481 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  340.22  602.5  1.78
4.4  Line 487 of rad 1.93766 links to 486 of rad 0.828827.  (no action taken)
     B1      X, Y, Z:  350.6  603.92  0.0
4.4  Line 502 of rad 1.22169 links to 501 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  385.88  596.97  16.18
4.4  Line 506 of rad 1.51828 links to 505 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  402.11  608.27  16.7
4.4  Line 511 of rad 1.91271 links to 510 of rad 0.666139.  (no action taken)
     B1      X, Y, Z:  416.66  627.82  17.99
4.4  Line 519 of rad 2.63816 links to 496 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  356.32  590.95  15.98
4.4  Line 526 of rad 1.988 links to 525 of rad 0.772999.  (no action taken)
     B1      X, Y, Z:  328.09  610.29  22.14
4.4  Line 541 of rad 1.42493 links to 540 of rad 0.645817.  (no action taken)
     B1      X, Y, Z:  369.08  510.91  1.49
4.4  Line 543 of rad 1.83969 links to 542 of rad 0.747185.  (no action taken)
     B1      X, Y, Z:  369.45  504.7  10.29
4.4  Line 553 of rad 2.90922 links to 552 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  366.16  554.33  4.61
4.4  Line 559 of rad 1.2229 links to 558 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  395.2  551.32  0.0
4.4  Line 567 of rad 1.49044 links to 566 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  430.2  538.12  0.77
4.4  Line 586 of rad 1.11913 links to 585 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  440.3  547.85  0.0
4.4  Line 590 of rad 1.15624 links to 589 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  458.04  540.88  0.0
4.4  Line 597 of rad 0.994 links to 596 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  486.35  532.48  0.0
4.4  Line 600 of rad 1.34913 links to 599 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  499.86  529.72  0.37
4.4  Line 604 of rad 1.21663 links to 603 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  501.71  549.1  4.07
4.4  Line 612 of rad 1.39288 links to 611 of rad 0.562674.  (no action taken)
     B1      X, Y, Z:  475.29  539.82  0.0
4.4  Line 625 of rad 0.994 links to 624 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  464.27  600.52  3.22
4.4  Line 629 of rad 1.94327 links to 628 of rad 0.88627.  (no action taken)
     B1      X, Y, Z:  226.09  567.15  4.08
4.4  Line 636 of rad 2.6523 links to 635 of rad 1.08424.  (no action taken)
     B1      X, Y, Z:  219.03  533.4  5.66
4.4  Line 642 of rad 1.40554 links to 641 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  213.87  540.64  1.07
4.4  Line 653 of rad 1.988 links to 652 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  162.3  527.4  5.99
4.4  Line 656 of rad 2.485 links to 655 of rad 1.08192.  (no action taken)
     B1      X, Y, Z:  147.54  525.67  7.19
4.4  Line 672 of rad 1.3905 links to 671 of rad 0.615087.  (no action taken)
     B1      X, Y, Z:  101.29  490.2  2.14
4.4  Line 678 of rad 1.27611 links to 677 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  111.79  462.85  7.05
4.4  Line 685 of rad 2.03842 links to 684 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  89.92  507.24  15.04
4.4  Line 692 of rad 1.10191 links to 691 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  58.68  498.62  17.75
4.4  Line 695 of rad 1.988 links to 694 of rad 0.597971.  (no action taken)
     B1      X, Y, Z:  44.14  501.06  18.35
4.4  Line 712 of rad 1.11864 links to 711 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  44.2  475.4  13.72
4.4  Line 732 of rad 1.71213 links to 731 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  121.26  567.86  2.52
4.4  Line 736 of rad 1.21217 links to 735 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  121.1  587.04  0.0
4.4  Line 751 of rad 1.44973 links to 750 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  68.76  557.67  10.16
4.4  Line 758 of rad 0.994 links to 757 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  35.56  554.23  6.99
4.4  Line 761 of rad 1.24266 links to 760 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  22.57  547.23  6.99
4.4  Line 766 of rad 1.37795 links to 765 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  5.58  529.32  6.23
4.4  Line 769 of rad 1.51947 links to 768 of rad 0.703449.  (no action taken)
     B1      X, Y, Z:  83.59  563.83  9.0
4.4  Line 816 of rad 1.46968 links to 815 of rad 0.718627.  (no action taken)
     B1      X, Y, Z:  190.96  511.66  0.97
4.4  Line 825 of rad 1.47482 links to 824 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  159.92  541.93  0.0
4.4  Line 833 of rad 2.07967 links to 832 of rad 0.586609.  (no action taken)
     B1      X, Y, Z:  188.77  497.1  5.92
4.4  Line 847 of rad 1.83424 links to 846 of rad 0.76791.  (no action taken)
     B1      X, Y, Z:  198.4  487.1  4.06
4.4  Line 850 of rad 2.18085 links to 849 of rad 0.767716.  (no action taken)
     B1      X, Y, Z:  187.49  477.44  4.64
4.4  Line 870 of rad 1.39815 links to 869 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  119.91  406.46  17.26
4.4  Line 874 of rad 2.48361 links to 873 of rad 1.24166.  (no action taken)
     B1      X, Y, Z:  103.74  395.13  19.7
4.4  Line 906 of rad 2.38919 links to 905 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  169.5  361.87  17.03
4.4  Line 916 of rad 1.31471 links to 915 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  140.09  324.05  19.06
4.4  Line 965 of rad 1.41083 links to 964 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  131.55  362.7  2.12
4.4  Line 969 of rad 0.994 links to 968 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  126.04  381.42  2.44
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  219.43  615.32  12.03
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 103
Number of type B2 irregularities = 0
Number of type C irregularities = 0
