# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\SW161129-06A_1_11_40X_Striatum_reconstruction_neuron_1.swc.swc created with StdSwc version 1.31 on 4/6/19.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\SW161129-06A_1_11_40X_Striatum_reconstruction_neuron_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 12.6114 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  259.37  196.85  0.0
4.3  Radius of line 5 at 9.44762 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  258.83  201.79  0.0
4.3  Radius of line 14 at 9.13536 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  256.66  191.42  0.0
4.3  Radius of line 15 at 9.94 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  252.81  188.28  0.0
4.3  Radius of line 16 at 11.431 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  250.05  186.26  0.0
4.3  Radius of line 17 at 10.934 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  245.76  185.0  0.0
4.3  Radius of line 18 at 8.99659 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  240.81  184.71  0.0
4.3  Radius of line 135 at 8.88671 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  253.23  184.71  0.0
4.3  Radius of line 263 at 9.94 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  262.47  194.14  0.0
4.3  Radius of line 264 at 10.5847 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  264.49  196.15  0.0
4.3  Radius of line 265 at 8.9798 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  266.06  200.63  0.0
4.3  Radius of line 281 at 8.26118 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  266.85  192.06  0.78
4.3  Radius of line 643 at 11.5041 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  258.93  197.85  1.62
2.5  Seg length ending at pt. 126 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  213.17  137.33  10.85
2.5  Seg length ending at pt. 512 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  355.68  132.01  7.97
2.5  Seg length ending at pt. 596 <= 0.1 at 0.01.  (removed)
     A       X, Y, Z:  613.49  153.75  3.87
4.4  Line 12 of rad 1.491 links to 11 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  257.77  236.03  0.0
4.4  Line 35 of rad 1.92259 links to 34 of rad 0.84486.  (no action taken)
     B1      X, Y, Z:  162.66  156.83  3.06
4.4  Line 51 of rad 1.46656 links to 50 of rad 0.720242.  (no action taken)
     B1      X, Y, Z:  94.58  119.59  6.02
4.4  Line 73 of rad 1.342 links to 72 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  26.27  70.26  14.49
4.4  Line 77 of rad 0.994 links to 76 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  23.29  51.25  14.0
4.4  Line 109 of rad 1.26516 links to 108 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  196.55  124.01  15.76
4.4  Line 115 of rad 0.994 links to 114 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  173.83  105.61  17.07
4.4  Line 123 of rad 1.3181 links to 122 of rad 0.606275.  (no action taken)
     B1      X, Y, Z:  190.51  81.6  13.48
4.4  Line 129 of rad 0.994 links to 128 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  201.94  129.38  9.58
4.4  Line 156 of rad 1.34765 links to 155 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  285.99  95.18  0.14
4.4  Line 166 of rad 1.65787 links to 165 of rad 0.609531.  (no action taken)
     B1      X, Y, Z:  291.23  46.08  0.0
4.4  Line 173 of rad 1.18905 links to 172 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  306.24  14.93  0.0
4.4  Line 174 of rad 2.45 links to 173 of rad 1.18905.  (no action taken)
     B1      X, Y, Z:  308.85  10.71  0.0
4.4  Line 184 of rad 1.68944 links to 183 of rad 0.770862.  (no action taken)
     B1      X, Y, Z:  267.19  67.4  3.0
4.4  Line 195 of rad 1.47795 links to 194 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  240.18  20.23  2.36
4.4  Line 209 of rad 1.988 links to 208 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  239.78  114.2  0.61
4.4  Line 223 of rad 2.485 links to 222 of rad 1.19867.  (no action taken)
     B1      X, Y, Z:  233.04  107.91  0.75
4.4  Line 227 of rad 0.994 links to 226 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  234.45  93.43  0.0
4.4  Line 230 of rad 1.94254 links to 229 of rad 0.69078.  (no action taken)
     B1      X, Y, Z:  231.99  78.92  0.06
4.4  Line 253 of rad 0.994 links to 252 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  228.1  88.31  3.26
4.4  Line 260 of rad 0.994 links to 259 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  255.78  68.77  8.64
4.4  Line 301 of rad 1.46378 links to 300 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  341.21  184.98  6.18
4.4  Line 315 of rad 1.1885 links to 314 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  360.87  179.69  0.48
4.4  Line 322 of rad 1.988 links to 321 of rad 0.664827.  (no action taken)
     B1      X, Y, Z:  368.2  206.77  0.55
4.4  Line 335 of rad 1.73675 links to 334 of rad 0.670234.  (no action taken)
     B1      X, Y, Z:  368.65  212.61  5.83
4.4  Line 340 of rad 2.15782 links to 339 of rad 0.609913.  (no action taken)
     B1      X, Y, Z:  391.83  215.9  9.44
4.4  Line 343 of rad 1.20615 links to 342 of rad 0.509132.  (no action taken)
     B1      X, Y, Z:  405.99  217.62  5.43
4.4  Line 363 of rad 1.22911 links to 362 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  385.23  234.13  17.06
4.4  Line 365 of rad 1.13399 links to 364 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  391.69  241.6  18.24
4.4  Line 380 of rad 2.47926 links to 379 of rad 1.17607.  (no action taken)
     B1      X, Y, Z:  272.75  113.39  11.05
4.4  Line 388 of rad 1.21836 links to 387 of rad 0.570854.  (no action taken)
     B1      X, Y, Z:  255.81  77.91  13.78
4.4  Line 408 of rad 1.491 links to 407 of rad 0.677088.  (no action taken)
     B1      X, Y, Z:  262.04  66.77  14.2
4.4  Line 414 of rad 1.47715 links to 413 of rad 0.734899.  (no action taken)
     B1      X, Y, Z:  290.47  60.8  6.89
4.4  Line 423 of rad 0.994 links to 422 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  327.7  45.04  1.0
4.4  Line 443 of rad 2.60488 links to 442 of rad 0.994.  (no action taken)
     B1      X, Y, Z:  312.12  143.84  7.04
4.4  Line 449 of rad 1.491 links to 448 of rad 0.6958.  (no action taken)
     B1      X, Y, Z:  337.02  132.01  7.99
4.4  Line 453 of rad 1.28362 links to 452 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  353.57  129.31  13.41
4.4  Line 468 of rad 1.70804 links to 467 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  326.89  89.13  15.38
4.4  Line 490 of rad 1.20611 links to 489 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  351.2  87.96  0.09
4.4  Line 493 of rad 2.485 links to 492 of rad 0.952709.  (no action taken)
     B1      X, Y, Z:  342.76  75.89  0.21
4.4  Line 501 of rad 1.491 links to 500 of rad 0.552729.  (no action taken)
     B1      X, Y, Z:  327.29  40.75  10.72
4.4  Line 507 of rad 1.73394 links to 506 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  313.13  15.84  18.8
4.4  Line 522 of rad 0.994 links to 521 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  405.36  132.03  5.75
4.4  Line 533 of rad 0.994 links to 532 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  426.78  88.52  4.85
4.4  Line 541 of rad 1.64213 links to 540 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  418.73  132.51  5.0
4.4  Line 548 of rad 1.12447 links to 547 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  452.77  137.98  5.92
4.4  Line 551 of rad 1.04502 links to 550 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  467.64  138.63  5.05
4.4  Line 559 of rad 1.07527 links to 558 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  503.47  144.43  5.36
4.4  Line 561 of rad 2.24278 links to 560 of rad 0.53006.  (no action taken)
     B1      X, Y, Z:  511.69  140.41  0.59
4.4  Line 571 of rad 0.994 links to 570 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  492.34  113.37  3.0
4.4  Line 572 of rad 0.997365 links to 558 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  503.22  144.43  5.81
4.4  Line 601 of rad 1.9868 links to 600 of rad 0.896265.  (no action taken)
     B1      X, Y, Z:  638.32  153.75  2.06
4.4  Line 607 of rad 1.28328 links to 606 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  668.09  154.02  0.19
4.4  Line 612 of rad 2.17579 links to 611 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  692.31  153.78  0.83
4.4  Line 621 of rad 1.48675 links to 620 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  734.64  150.46  5.94
4.4  Line 630 of rad 0.994 links to 629 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  775.01  135.12  12.0
4.4  Line 640 of rad 0.994 links to 639 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  637.57  135.07  4.24
4.4  Line 669 of rad 1.82863 links to 668 of rad 0.799862.  (no action taken)
     B1      X, Y, Z:  147.87  202.38  18.98
4.4  Line 674 of rad 1.41366 links to 673 of rad 0.590411.  (no action taken)
     B1      X, Y, Z:  124.06  209.06  19.62
4.4  Line 686 of rad 0.994 links to 685 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  156.26  183.28  16.0
4.4  Line 692 of rad 1.42911 links to 691 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  134.87  162.72  17.02
4.4  Line 695 of rad 1.96958 links to 694 of rad 0.7662.  (no action taken)
     B1      X, Y, Z:  125.54  151.21  17.46
4.4  Line 707 of rad 1.38884 links to 706 of rad 0.692977.  (no action taken)
     B1      X, Y, Z:  243.84  260.01  7.16
4.4  Line 718 of rad 1.3494 links to 717 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  268.1  257.08  17.15
4.4  Line 720 of rad 2.4027 links to 719 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  275.87  251.23  19.22
4.4  Line 734 of rad 1.98434 links to 733 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  209.31  299.15  15.19
4.4  Line 737 of rad 1.988 links to 736 of rad 0.522516.  (no action taken)
     B1      X, Y, Z:  196.37  306.39  17.09
4.4  Line 741 of rad 1.25105 links to 740 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  177.87  312.17  19.38
4.4  Line 754 of rad 1.53036 links to 753 of rad 0.691834.  (no action taken)
     B1      X, Y, Z:  281.34  279.12  5.27
4.4  Line 760 of rad 1.32878 links to 759 of rad 0.600386.  (no action taken)
     B1      X, Y, Z:  302.14  292.52  6.0
4.4  Line 786 of rad 0.994 links to 785 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  366.98  383.82  0.34
4.4  Line 795 of rad 1.491 links to 794 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  344.26  418.63  2.03
4.4  Line 814 of rad 1.11301 links to 813 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  276.7  306.35  0.51
4.4  Line 826 of rad 1.491 links to 825 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  242.78  319.16  9.15
4.4  Line 847 of rad 1.60347 links to 846 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  240.73  421.6  11.66
4.4  Line 863 of rad 1.25264 links to 862 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  238.53  497.8  13.97
4.4  Line 878 of rad 1.54894 links to 877 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  201.13  560.61  14.96
4.4  Line 881 of rad 1.31232 links to 862 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  242.5  499.06  14.6
4.4  Line 883 of rad 2.07158 links to 882 of rad 0.743085.  (no action taken)
     B1      X, Y, Z:  248.86  506.64  15.1
4.4  Line 887 of rad 1.16677 links to 886 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  263.49  518.36  16.01
4.4  Line 890 of rad 1.38357 links to 889 of rad 0.60636.  (no action taken)
     B1      X, Y, Z:  277.33  523.5  16.56
4.4  Line 898 of rad 1.491 links to 897 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  307.66  545.0  18.41
4.4  Line 909 of rad 1.28194 links to 908 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  254.52  549.32  0.39
4.4  Line 920 of rad 1.62512 links to 919 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  202.62  315.81  17.09
4.4  Line 930 of rad 1.42268 links to 929 of rad 0.497.  (no action taken)
     B1      X, Y, Z:  177.61  352.77  19.16
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  255.07  193.78  1.24
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 99
Number of type B2 irregularities = 0
Number of type C irregularities = 0
