# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\Striatum-2.imx.swc.swc created with StdSwc version 1.31 on 11/30/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\Striatum-2.imx.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  165.01  128.55  661.23
2.5  Seg length ending at pt. 959 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.07  104.35  654.84
2.5  Seg length ending at pt. 1260 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  170.76  108.02  656.16
2.4  Seg length ending at pt. 1838 >= 6.0 stdevs above mean at 1.0747.  (no action taken)
     B1      X, Y, Z:  149.8  116.97  652.74
2.4  Seg length ending at pt. 1890 >= 6.0 stdevs above mean at 0.9083.  (no action taken)
     B1      X, Y, Z:  149.38  117.57  651.06
2.5  Seg length ending at pt. 3895 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  182.18  154.17  657.71
2.4  Seg length ending at pt. 4511 >= 6.0 stdevs above mean at 1.1096.  (no action taken)
     B1      X, Y, Z:  236.17  121.29  664.69
2.4  Seg length ending at pt. 4960 >= 6.0 stdevs above mean at 0.8914.  (no action taken)
     B1      X, Y, Z:  164.93  128.24  660.05
2.5  Seg length ending at pt. 5013 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.68  128.84  660.66
2.5  Seg length ending at pt. 5719 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  138.4  134.24  672.87
2.5  Seg length ending at pt. 5978 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  138.4  134.24  672.87
2.4  Seg length ending at pt. 6336 >= 6.0 stdevs above mean at 0.8623.  (no action taken)
     B1      X, Y, Z:  106.13  137.55  665.88
2.5  Seg length ending at pt. 6654 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  103.67  113.9  676.65
2.4  Seg length ending at pt. 6672 >= 6.0 stdevs above mean at 0.8629.  (no action taken)
     B1      X, Y, Z:  129.91  133.7  668.69
2.5  Seg length ending at pt. 6682 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  138.08  134.33  673.13
2.4  Seg length ending at pt. 6683 >= 6.0 stdevs above mean at 1.299.  (no action taken)
     B1      X, Y, Z:  137.94  134.39  674.42
2.4  Seg length ending at pt. 6684 >= 6.0 stdevs above mean at 0.8896.  (no action taken)
     B1      X, Y, Z:  137.82  134.44  675.3
2.4  Seg length ending at pt. 6879 >= 6.0 stdevs above mean at 0.975.  (no action taken)
     B1      X, Y, Z:  135.49  137.0  682.14
2.5  Seg length ending at pt. 6952 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.39  129.11  660.32
2.5  Seg length ending at pt. 7052 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  158.32  157.32  662.41
2.5  Seg length ending at pt. 7643 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  158.32  157.32  662.41
2.4  Seg length ending at pt. 8918 >= 6.0 stdevs above mean at 0.8524.  (no action taken)
     B1      X, Y, Z:  205.1  213.02  684.31
2.5  Seg length ending at pt. 8931 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  181.25  198.1  675.34
2.4  Seg length ending at pt. 8932 >= 6.0 stdevs above mean at 1.0108.  (no action taken)
     B1      X, Y, Z:  181.47  198.28  676.31
2.5  Seg length ending at pt. 9001 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  176.66  188.95  673.64
2.6  Line 2 and line 2525 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  164.68  128.84  660.66
2.6  Line 2 and line 4959 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  164.68  128.84  660.66
2.6  Line 10 and line 1292 have the same coordinates.  (second line removed)
     A      X, Y, Z:  163.25  127.16  659.76
2.6  Line 57 and line 496 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.46  113.93  657.39
2.6  Line 81 and line 483 have the same coordinates.  (second line removed)
     A      X, Y, Z:  173.69  112.79  657.47
2.6  Line 450 and line 467 have the same coordinates.  (second line removed)
     A      X, Y, Z:  260.68  64.87  665.21
2.6  Line 515 and line 1101 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.85  110.34  655.67
2.6  Line 530 and line 1052 have the same coordinates.  (second line removed)
     A      X, Y, Z:  174.93  109.27  654.72
2.6  Line 533 and line 1037 have the same coordinates.  (second line removed)
     A      X, Y, Z:  175.44  108.98  654.49
2.6  Line 573 and line 787 have the same coordinates.  (second line removed)
     A      X, Y, Z:  186.65  104.43  655.3
2.6  Line 1106 and line 1120 have the same coordinates.  (second line removed)
     A      X, Y, Z:  170.69  108.33  656.2
2.6  Line 1322 and line 2232 have the same coordinates.  (second line removed)
     A      X, Y, Z:  156.99  120.76  656.91
2.6  Line 1347 and line 1914 have the same coordinates.  (second line removed)
     A      X, Y, Z:  150.57  116.7  655.34
2.6  Line 1352 and line 1838 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.91  116.65  653.76
2.6  Line 1380 and line 1716 have the same coordinates.  (second line removed)
     A      X, Y, Z:  141.43  115.68  651.5
2.6  Line 1403 and line 1645 have the same coordinates.  (second line removed)
     A      X, Y, Z:  135.54  112.42  648.88
2.6  Line 1416 and line 1629 have the same coordinates.  (second line removed)
     A      X, Y, Z:  135.18  108.07  648.36
2.6  Line 1568 and line 1611 have the same coordinates.  (second line removed)
     A      X, Y, Z:  91.26  99.46  659.65
2.6  Line 1840 and line 1890 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.66  117.22  651.85
2.6  Line 1948 and line 2188 have the same coordinates.  (second line removed)
     A      X, Y, Z:  143.17  109.29  659.94
2.6  Line 1954 and line 2160 have the same coordinates.  (second line removed)
     A      X, Y, Z:  142.17  108.08  660.78
2.6  Line 1987 and line 2141 have the same coordinates.  (second line removed)
     A      X, Y, Z:  136.64  100.58  666.45
2.6  Line 1996 and line 2129 have the same coordinates.  (second line removed)
     A      X, Y, Z:  135.66  98.39  667.7
2.6  Line 2193 and line 2213 have the same coordinates.  (second line removed)
     A      X, Y, Z:  142.18  107.68  659.16
2.6  Line 2283 and line 2399 have the same coordinates.  (second line removed)
     A      X, Y, Z:  154.17  105.65  654.3
2.6  Line 2291 and line 2377 have the same coordinates.  (second line removed)
     A      X, Y, Z:  152.96  103.37  654.92
2.6  Line 2297 and line 2360 have the same coordinates.  (second line removed)
     A      X, Y, Z:  153.53  101.91  655.71
2.6  Line 2404 and line 2501 have the same coordinates.  (second line removed)
     A      X, Y, Z:  153.17  103.9  653.49
2.6  Line 2525 and line 4959 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  164.68  128.84  660.66
2.6  Line 2577 and line 4022 have the same coordinates.  (second line removed)
     A      X, Y, Z:  176.81  138.84  659.22
2.6  Line 2595 and line 4006 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.19  144.03  658.56
2.6  Line 2603 and line 3989 have the same coordinates.  (second line removed)
     A      X, Y, Z:  178.45  146.19  658.66
2.6  Line 2618 and line 3926 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.38  150.44  658.38
2.6  Line 2625 and line 3909 have the same coordinates.  (second line removed)
     A      X, Y, Z:  180.61  151.78  658.01
2.6  Line 2634 and line 3564 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.1  153.95  657.83
2.6  Line 2638 and line 3214 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.01  154.77  657.9
2.6  Line 2769 and line 2984 have the same coordinates.  (second line removed)
     A      X, Y, Z:  191.56  191.62  661.44
2.6  Line 3463 and line 3548 have the same coordinates.  (second line removed)
     A      X, Y, Z:  250.71  135.91  651.05
2.6  Line 4045 and line 4941 have the same coordinates.  (second line removed)
     A      X, Y, Z:  183.59  141.55  661.26
2.6  Line 4049 and line 4608 have the same coordinates.  (second line removed)
     A      X, Y, Z:  184.25  142.32  661.99
2.6  Line 4094 and line 4594 have the same coordinates.  (second line removed)
     A      X, Y, Z:  194.4  135.05  667.03
2.6  Line 4172 and line 4580 have the same coordinates.  (second line removed)
     A      X, Y, Z:  216.89  131.6  673.63
2.6  Line 4175 and line 4529 have the same coordinates.  (second line removed)
     A      X, Y, Z:  217.78  131.88  673.44
2.6  Line 4248 and line 4511 have the same coordinates.  (second line removed)
     A      X, Y, Z:  235.69  121.32  665.69
2.6  Line 4259 and line 4401 have the same coordinates.  (second line removed)
     A      X, Y, Z:  238.52  120.03  665.48
2.6  Line 4615 and line 4920 have the same coordinates.  (second line removed)
     A      X, Y, Z:  186.25  143.72  661.97
2.6  Line 4685 and line 4871 have the same coordinates.  (second line removed)
     A      X, Y, Z:  207.56  143.46  666.92
2.6  Line 4785 and line 4857 have the same coordinates.  (second line removed)
     A      X, Y, Z:  231.87  143.02  673.54
2.6  Line 5082 and line 6926 have the same coordinates.  (second line removed)
     A      X, Y, Z:  146.16  134.12  667.92
2.6  Line 5095 and line 5705 have the same coordinates.  (second line removed)
     A      X, Y, Z:  142.33  134.15  670.27
2.6  Line 5147 and line 5694 have the same coordinates.  (second line removed)
     A      X, Y, Z:  128.37  128.78  661.79
2.6  Line 5162 and line 5424 have the same coordinates.  (second line removed)
     A      X, Y, Z:  125.2  125.96  661.17
2.6  Line 5184 and line 5411 have the same coordinates.  (second line removed)
     A      X, Y, Z:  118.75  124.88  658.65
2.6  Line 5505 and line 5669 have the same coordinates.  (second line removed)
     A      X, Y, Z:  105.38  113.15  664.56
2.6  Line 5518 and line 5643 have the same coordinates.  (second line removed)
     A      X, Y, Z:  104.5  109.5  667.08
2.6  Line 5581 and line 5617 have the same coordinates.  (second line removed)
     A      X, Y, Z:  96.35  93.12  672.63
2.6  Line 5761 and line 5955 have the same coordinates.  (second line removed)
     A      X, Y, Z:  129.21  142.32  669.87
2.6  Line 6028 and line 6672 have the same coordinates.  (second line removed)
     A      X, Y, Z:  130.02  133.8  669.54
2.6  Line 6050 and line 6444 have the same coordinates.  (second line removed)
     A      X, Y, Z:  123.18  132.65  668.06
2.6  Line 6070 and line 6391 have the same coordinates.  (second line removed)
     A      X, Y, Z:  117.82  134.69  665.26
2.6  Line 6100 and line 6363 have the same coordinates.  (second line removed)
     A      X, Y, Z:  109.12  136.94  665.29
2.6  Line 6110 and line 6336 have the same coordinates.  (second line removed)
     A      X, Y, Z:  106.39  137.61  665.06
2.6  Line 6131 and line 6324 have the same coordinates.  (second line removed)
     A      X, Y, Z:  100.33  137.98  666.24
2.6  Line 6159 and line 6310 have the same coordinates.  (second line removed)
     A      X, Y, Z:  92.07  139.47  666.04
2.6  Line 6184 and line 6291 have the same coordinates.  (second line removed)
     A      X, Y, Z:  85.35  142.42  666.41
2.6  Line 6535 and line 6620 have the same coordinates.  (second line removed)
     A      X, Y, Z:  104.0  114.03  676.04
2.6  Line 6699 and line 6879 have the same coordinates.  (second line removed)
     A      X, Y, Z:  135.53  136.91  681.17
2.6  Line 6704 and line 6854 have the same coordinates.  (second line removed)
     A      X, Y, Z:  134.56  137.99  680.88
2.6  Line 6989 and line 9230 have the same coordinates.  (second line removed)
     A      X, Y, Z:  158.99  138.87  661.52
2.6  Line 7020 and line 9154 have the same coordinates.  (second line removed)
     A      X, Y, Z:  158.99  148.07  662.64
2.6  Line 7175 and line 7496 have the same coordinates.  (second line removed)
     A      X, Y, Z:  131.78  181.92  656.27
2.6  Line 7270 and line 7483 have the same coordinates.  (second line removed)
     A      X, Y, Z:  111.22  201.51  653.7
2.6  Line 7285 and line 7470 have the same coordinates.  (second line removed)
     A      X, Y, Z:  108.77  205.06  653.42
2.6  Line 7307 and line 7420 have the same coordinates.  (second line removed)
     A      X, Y, Z:  102.97  208.14  652.11
2.6  Line 7674 and line 8121 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.88  165.85  662.33
2.6  Line 7703 and line 7971 have the same coordinates.  (second line removed)
     A      X, Y, Z:  169.08  171.55  661.04
2.6  Line 8045 and line 8088 have the same coordinates.  (second line removed)
     A      X, Y, Z:  182.45  189.06  658.6
2.6  Line 8277 and line 8453 have the same coordinates.  (second line removed)
     A      X, Y, Z:  161.37  209.08  666.94
2.6  Line 8291 and line 8332 have the same coordinates.  (second line removed)
     A      X, Y, Z:  164.97  211.36  669.81
2.6  Line 8352 and line 8434 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.66  216.03  673.53
2.6  Line 8355 and line 8420 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.69  216.63  673.75
2.6  Line 8495 and line 9055 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.84  161.31  668.02
2.6  Line 8557 and line 9039 have the same coordinates.  (second line removed)
     A      X, Y, Z:  175.64  177.31  672.18
2.6  Line 8595 and line 8611 have the same coordinates.  (second line removed)
     A      X, Y, Z:  176.55  188.63  673.54
2.6  Line 8631 and line 8989 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.81  193.81  674.46
2.6  Line 8645 and line 8779 have the same coordinates.  (second line removed)
     A      X, Y, Z:  181.1  197.87  675.08
2.6  Line 8879 and line 8918 have the same coordinates.  (second line removed)
     A      X, Y, Z:  205.05  213.06  683.46
2.6  Line 9177 and line 9205 have the same coordinates.  (second line removed)
     A      X, Y, Z:  166.32  150.03  666.69
2.6  Line 9248 and line 9553 have the same coordinates.  (second line removed)
     A      X, Y, Z:  154.99  142.68  663.63
2.6  Line 9268 and line 9528 have the same coordinates.  (second line removed)
     A      X, Y, Z:  149.35  144.91  663.83
2.6  Line 9388 and line 9507 have the same coordinates.  (second line removed)
     A      X, Y, Z:  121.61  166.69  656.32
 
 


Number of type A irregularities = 101
Number of type B1 irregularities = 15
Number of type B2 irregularities = 0
Number of type C irregularities = 0
