# Standardization file for C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\CeA_Astrocyte_10_005.swc.swc created with StdSwc version 1.31 on 11/30/21.
# Edited SWC file saved as C:\Users\Carolina\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\CeA_Astrocyte_10_005.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  134.67  226.21  3.83
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  134.69  226.21  3.8
2.5  Seg length ending at pt. 4 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  134.74  226.22  3.71
2.5  Seg length ending at pt. 389 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  134.67  226.21  3.83
2.5  Seg length ending at pt. 487 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  134.67  226.21  3.83
2.4  Seg length ending at pt. 488 >= 6.0 stdevs above mean at 1.3167.  (no action taken)
     B1      X, Y, Z:  135.07  225.88  4.99
2.5  Seg length ending at pt. 538 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  134.67  226.21  3.83
2.5  Seg length ending at pt. 577 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  134.67  226.21  3.83
2.4  Seg length ending at pt. 578 >= 6.0 stdevs above mean at 1.3863.  (no action taken)
     B1      X, Y, Z:  135.01  225.91  5.14
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  134.71  226.22  3.77
2.6  Line 1 and line 276 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  134.67  226.21  3.83
2.1  Line 1 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  134.67  226.21  3.83
 
 


Number of type A irregularities = 7
Number of type B1 irregularities = 5
Number of type B2 irregularities = 0
Number of type C irregularities = 0
