# Standardization file for C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\invivo_OPCs_cell_1.swc.swc created with StdSwc version 1.31 on 6/26/24.
# Edited SWC file saved as C:\Users\karot\Desktop\gaa2ct\data_autoproc\Temp_LMeasure\invivo_OPCs_cell_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.5  Radius of terminal line 150 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  37.64  59.32  -8.48
4.5  Radius of terminal line 220 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.23  46.16  -11.48
4.3  Radius of line 294 at 1.256 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  30.07  34.8  -8.48
4.5  Radius of terminal line 316 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  26.1  32.82  -8.48
4.5  Radius of terminal line 412 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  27.9  33.71  -17.48
4.5  Radius of terminal line 427 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  30.25  35.34  -17.48
4.5  Radius of terminal line 449 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.41  37.68  -14.48
4.5  Radius of terminal line 632 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  62.57  74.1  3.73
4.5  Radius of terminal line 682 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  56.27  72.29  3.73
4.5  Radius of terminal line 913 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.03  65.32  -17.46
4.5  Radius of terminal line 939 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  42.1  53.6  -12.96
4.5  Radius of terminal line 1043 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.0  59.63  -15.86
4.5  Radius of terminal line 1118 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  36.61  29.37  -11.26
4.5  Radius of terminal line 1250 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.92  29.01  -14.28
4.5  Radius of terminal line 1349 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  38.42  11.35  -18.78
4.5  Radius of terminal line 1410 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  35.71  14.41  -20.28
4.5  Radius of terminal line 1442 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.75  36.6  -18.76
4.5  Radius of terminal line 1443 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  43.46  31.19  -18.76
4.5  Radius of terminal line 1481 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  36.78  33.0  -18.76
4.5  Radius of terminal line 1487 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.8  31.73  -15.78
4.5  Radius of terminal line 1582 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.31  14.96  -18.78
4.5  Radius of terminal line 1786 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  26.87  57.68  -2.27
4.5  Radius of terminal line 1885 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.23  60.39  -11.26
4.5  Radius of terminal line 1989 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.88  70.85  -18.78
4.5  Radius of terminal line 2045 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  58.41  59.25  -2.64
4.5  Radius of terminal line 2163 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.59  76.79  8.23
4.5  Radius of terminal line 2243 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.57  37.14  -12.76
4.5  Radius of terminal line 2414 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  73.79  72.68  -8.22
4.5  Radius of terminal line 2549 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.23  76.82  -0.72
4.5  Radius of terminal line 2580 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  82.59  65.07  -6.77
4.5  Radius of terminal line 2614 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.84  73.18  -9.77
4.5  Radius of terminal line 2663 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  83.35  68.18  -2.22
4.5  Radius of terminal line 2665 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  80.64  65.29  -2.22
4.5  Radius of terminal line 2724 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  90.92  65.46  -5.22
4.3  Radius of line 2725 at 0.7933 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  62.75  49.21  -5.27
4.5  Radius of terminal line 2831 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  61.85  65.62  0.72
4.5  Radius of terminal line 3037 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.18  30.44  -14.63
4.5  Radius of terminal line 3144 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  50.25  55.93  12.2
4.5  Radius of terminal line 3309 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.63  11.22  6.19
4.5  Radius of terminal line 3470 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  26.08  30.87  1.69
4.5  Radius of terminal line 3516 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.21  38.09  3.19
4.5  Radius of terminal line 3672 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  49.42  19.1  -3.77
4.5  Radius of terminal line 3764 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.73  9.18  -2.27
4.5  Radius of terminal line 3805 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  67.45  28.66  3.73
4.5  Radius of terminal line 3948 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  38.17  52.82  4.81
4.5  Radius of terminal line 4031 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  51.59  56.77  7.35
4.5  Radius of terminal line 4109 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  42.57  68.85  7.35
4.5  Radius of terminal line 4215 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  35.55  43.42  23.85
4.5  Radius of terminal line 4371 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  88.85  59.0  -15.46
4.5  Radius of terminal line 4403 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  82.37  66.59  -15.46
4.5  Radius of terminal line 4456 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  76.96  63.52  -12.46
4.5  Radius of terminal line 4544 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  56.59  65.14  -13.96
4.5  Radius of terminal line 4575 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  62.53  64.23  -12.46
4.5  Radius of terminal line 4650 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  74.07  68.57  -12.46
4.5  Radius of terminal line 4736 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.34  76.5  -0.44
4.5  Radius of terminal line 4889 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  77.17  25.03  -6.61
4.5  Radius of terminal line 5004 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  89.96  53.88  -8.11
4.5  Radius of terminal line 5012 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.4  56.93  -8.11
4.5  Radius of terminal line 5048 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.54  57.12  -11.13
4.5  Radius of terminal line 5079 at 0.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  80.04  40.35  -8.11
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 7.7987.  (no action taken)
     B1      X, Y, Z:  55.13  43.64  -6.98
2.4  Seg length ending at pt. 366 >= 6.0 stdevs above mean at 3.1379.  (no action taken)
     B1      X, Y, Z:  35.46  36.07  -17.48
2.4  Seg length ending at pt. 450 >= 6.0 stdevs above mean at 8.4618.  (no action taken)
     B1      X, Y, Z:  56.63  43.99  3.73
2.4  Seg length ending at pt. 683 >= 6.0 stdevs above mean at 5.6028.  (no action taken)
     B1      X, Y, Z:  60.06  40.02  -2.27
2.5  Seg length ending at pt. 745 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  48.82  37.91  -11.26
2.5  Seg length ending at pt. 1189 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  42.89  28.81  -15.78
2.4  Seg length ending at pt. 1280 >= 6.0 stdevs above mean at 3.2588.  (no action taken)
     B1      X, Y, Z:  39.32  23.25  -18.78
2.4  Seg length ending at pt. 1411 >= 6.0 stdevs above mean at 3.1934.  (no action taken)
     B1      X, Y, Z:  43.64  31.19  -18.76
2.4  Seg length ending at pt. 2164 >= 6.0 stdevs above mean at 8.5404.  (no action taken)
     B1      X, Y, Z:  59.7  38.93  -8.27
2.4  Seg length ending at pt. 2244 >= 6.0 stdevs above mean at 5.1484.  (no action taken)
     B1      X, Y, Z:  65.85  48.17  -3.72
2.5  Seg length ending at pt. 2449 <= 0.1 at 0.05.  (removed)
     A       X, Y, Z:  77.79  60.1  -3.72
2.4  Seg length ending at pt. 2725 >= 6.0 stdevs above mean at 4.6248.  (no action taken)
     B1      X, Y, Z:  62.75  49.21  -5.27
2.4  Seg length ending at pt. 2832 >= 6.0 stdevs above mean at 8.2546.  (no action taken)
     B1      X, Y, Z:  63.5  50.28  3.37
2.4  Seg length ending at pt. 3038 >= 6.0 stdevs above mean at 8.7412.  (no action taken)
     B1      X, Y, Z:  57.64  40.6  3.19
2.4  Seg length ending at pt. 3146 >= 6.0 stdevs above mean at 3.1401.  (no action taken)
     B1      X, Y, Z:  54.21  39.89  6.19
2.4  Seg length ending at pt. 3517 >= 6.0 stdevs above mean at 8.1085.  (no action taken)
     B1      X, Y, Z:  59.16  38.57  0.72
2.4  Seg length ending at pt. 3536 >= 6.0 stdevs above mean at 3.6175.  (no action taken)
     B1      X, Y, Z:  59.52  36.24  -0.77
2.4  Seg length ending at pt. 3806 >= 6.0 stdevs above mean at 7.47.  (no action taken)
     B1      X, Y, Z:  60.25  44.86  4.35
2.5  Seg length ending at pt. 3969 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  53.92  48.84  13.35
2.4  Seg length ending at pt. 4216 >= 6.0 stdevs above mean at 7.8836.  (no action taken)
     B1      X, Y, Z:  65.59  50.0  -7.95
2.4  Seg length ending at pt. 4255 >= 6.0 stdevs above mean at 3.0774.  (no action taken)
     B1      X, Y, Z:  71.9  55.59  -12.46
2.4  Seg length ending at pt. 4494 >= 6.0 stdevs above mean at 3.5825.  (no action taken)
     B1      X, Y, Z:  63.8  60.1  -13.96
2.4  Seg length ending at pt. 4737 >= 6.0 stdevs above mean at 7.4231.  (no action taken)
     B1      X, Y, Z:  66.2  48.14  -8.1
2.5  Seg length ending at pt. 4756 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  69.43  47.74  -6.63
2.4  Seg length ending at pt. 4890 >= 6.0 stdevs above mean at 3.4582.  (no action taken)
     B1      X, Y, Z:  75.18  43.06  -9.61
2.7  Line 1443 of rad 0.5 is an included side branch.  (removed)
     A      X, Y, Z:  43.46  31.19  -18.76
2.7  Line 4575 of rad 0.5 is an included side branch.  (removed)
     A      X, Y, Z:  62.53  64.23  -12.46
2.6  Line 460 and line 464 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.91  45.78  3.73
2.6  Line 461 and line 463 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.73  45.6  3.73
2.6  Line 490 and line 496 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.89  50.12  3.73
2.6  Line 491 and line 495 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.89  50.3  3.73
2.6  Line 492 and line 494 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.71  50.48  3.73
2.6  Line 980 and line 986 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  40.3  51.52  -14.35
2.6  Line 981 and line 985 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  40.11  51.52  -12.85
2.6  Line 982 and line 984 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  39.93  51.52  -12.85
2.6  Line 1896 and line 1898 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  47.98  56.07  -8.27
2.6  Line 2337 and line 2339 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  75.04  61.69  -3.72
2.6  Line 2382 and line 2394 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  74.32  69.26  -5.22
2.6  Line 2383 and line 2393 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  74.51  69.26  -3.72
2.6  Line 2384 and line 2392 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  74.68  69.43  -3.72
2.6  Line 2385 and line 2391 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  74.87  69.43  -3.72
2.6  Line 2386 and line 2390 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  75.04  69.62  -3.72
2.6  Line 2387 and line 2389 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  75.23  69.79  -3.72
2.6  Line 2450 and line 2616 have the same coordinates.  (second line removed)
     A      X, Y, Z:  77.93  60.24  -3.72
2.6  Line 2452 and line 2617 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  78.12  60.6  -3.72
2.6  Line 3604 and line 3673 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.53  25.06  -2.27
2.6  Line 3605 and line 3674 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.53  24.87  -2.27
2.6  Line 3606 and line 3675 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.53  24.69  -2.27
2.6  Line 3607 and line 3676 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  57.35  24.51  -2.27
2.6  Line 3832 and line 3838 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.56  45.77  4.35
2.6  Line 3833 and line 3837 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.38  45.77  4.35
2.6  Line 3834 and line 3836 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.2  45.59  4.35
2.6  Line 3994 and line 4000 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  53.21  52.99  13.35
2.6  Line 3995 and line 3999 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  53.03  52.99  13.35
2.6  Line 3996 and line 3998 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  52.85  52.99  13.35
2.6  Line 4321 and line 4323 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  80.93  59.18  -12.46
2.6  Line 4955 and line 4961 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  84.56  50.09  -9.61
4.4  Line 294 of rad 1.256 links to 293 of rad 0.5.  (no action taken)
     B1      X, Y, Z:  30.07  34.8  -8.48
2.1  Line 1 has 14 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  61.6  45.36  -2.98
 
 


Number of type A irregularities = 8
Number of type B1 irregularities = 111
Number of type B2 irregularities = 0
Number of type C irregularities = 0
