# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_9.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_9.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.39  168.4  42.15
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
4.3  Radius of line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.14  168.05  42.42
4.5  Radius of terminal line 8 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
4.5  Radius of terminal line 718 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
2.4  Seg length ending at pt. 718 >= 6.0 stdevs above mean at 1.2428.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
2.4  Seg length ending at pt. 719 >= 6.0 stdevs above mean at 1.178.  (no action taken)
     B1      X, Y, Z:  229.4  168.09  41.06
2.4  Seg length ending at pt. 1021 >= 6.0 stdevs above mean at 1.2141.  (no action taken)
     B1      X, Y, Z:  234.9  177.5  25.64
2.7  Line 8 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  229.19  168.3  42.2
2.7  Line 718 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  229.19  168.3  42.2
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  229.19  168.3  42.2
2.6  Line 5 and line 7 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  229.14  168.05  42.42
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
