# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_7.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_7.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  274.89  162.09  34.57
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  275.0  162.25  34.56
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  274.89  162.09  34.57
4.5  Radius of terminal line 600 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  274.89  162.09  34.57
2.4  Seg length ending at pt. 590 >= 6.0 stdevs above mean at 1.39.  (no action taken)
     B1      X, Y, Z:  275.69  153.0  39.42
2.4  Seg length ending at pt. 1068 >= 6.0 stdevs above mean at 1.4477.  (no action taken)
     B1      X, Y, Z:  261.39  154.5  13.53
2.7  Line 600 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  274.89  162.09  34.57
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  274.89  162.09  34.57
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
