# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_29.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_29.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  24.33  200.0  19.5
4.3  Radius of line 2 at 3.132 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  24.89  200.0  19.66
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  24.33  200.0  19.5
4.3  Radius of line 4 at 2.953 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  23.89  199.9  19.69
4.3  Radius of line 331 at 2.998 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  25.3  200.09  19.89
4.3  Radius of line 332 at 2.903 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  25.6  200.19  20.19
4.3  Radius of line 333 at 2.824 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  25.82  200.3  20.55
4.5  Radius of terminal line 1987 at 0.162 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  39.43  183.3  16.17
2.5  Seg length ending at pt. 1026 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  40.74  213.64  23.18
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  24.33  200.0  19.5
2.1  Line 1025 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  40.73  213.59  23.25
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
