# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_26.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_26.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  114.2  165.4  22.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.2  165.4  22.5
4.3  Radius of line 4 at 3.117 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  113.79  165.3  22.78
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.0  165.35  22.64
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.2  165.4  22.5
2.4  Seg length ending at pt. 7 >= 6.0 stdevs above mean at 1.3322.  (no action taken)
     B1      X, Y, Z:  114.09  164.8  23.85
2.4  Seg length ending at pt. 460 >= 6.0 stdevs above mean at 1.2945.  (no action taken)
     B1      X, Y, Z:  94.37  168.59  29.37
2.4  Seg length ending at pt. 2064 >= 6.0 stdevs above mean at 1.1455.  (no action taken)
     B1      X, Y, Z:  126.9  156.19  32.5
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  114.2  165.4  22.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  114.2  165.4  22.5
2.6  Line 934 and line 966 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  116.5  176.69  14.33
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
