# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_23.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_23.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  96.37  71.01  25.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.37  71.01  25.5
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  95.96  71.08  25.1
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  96.37  71.01  25.5
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 1.1401.  (no action taken)
     B1      X, Y, Z:  95.56  71.15  24.71
2.4  Seg length ending at pt. 1150 >= 6.0 stdevs above mean at 1.1127.  (no action taken)
     B1      X, Y, Z:  101.5  76.45  15.64
2.4  Seg length ending at pt. 1908 >= 6.0 stdevs above mean at 1.1432.  (no action taken)
     B1      X, Y, Z:  113.09  102.4  9.89
2.4  Seg length ending at pt. 2159 >= 6.0 stdevs above mean at 1.1167.  (no action taken)
     B1      X, Y, Z:  115.2  102.59  12.8
2.4  Seg length ending at pt. 2204 >= 6.0 stdevs above mean at 1.1887.  (no action taken)
     B1      X, Y, Z:  116.09  102.29  10.83
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  96.37  71.01  25.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  96.37  71.01  25.5
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
