# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_21.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_21.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  55.03  113.7  37.97
4.3  Radius of line 2 at 3.251 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.29  113.7  37.96
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.03  113.7  37.97
4.5  Radius of terminal line 134 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.03  113.7  37.97
4.5  Radius of terminal line 457 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.03  113.7  37.97
2.5  Seg length ending at pt. 761 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  59.6  110.0  37.07
2.4  Seg length ending at pt. 1121 >= 6.0 stdevs above mean at 1.1514.  (no action taken)
     B1      X, Y, Z:  69.04  106.7  23.78
2.7  Line 134 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  55.03  113.7  37.97
2.7  Line 457 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  55.03  113.7  37.97
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.03  113.7  37.97
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
