# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_2.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  261.69  238.3  16.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.69  238.3  16.5
4.5  Radius of terminal line 1519 at 0.242 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  254.8  237.0  23.92
2.4  Seg length ending at pt. 434 >= 6.0 stdevs above mean at 1.2019.  (no action taken)
     B1      X, Y, Z:  271.5  240.3  22.32
2.5  Seg length ending at pt. 737 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  255.02  238.05  20.53
2.4  Seg length ending at pt. 961 >= 6.0 stdevs above mean at 1.149.  (no action taken)
     B1      X, Y, Z:  251.0  230.0  37.31
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  261.69  238.3  16.5
2.1  Line 736 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  255.05  238.09  20.5
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
