# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_17.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_17.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
4.5  Radius of terminal line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
4.5  Radius of terminal line 216 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
4.5  Radius of terminal line 1309 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
2.4  Seg length ending at pt. 185 >= 6.0 stdevs above mean at 1.5225.  (no action taken)
     B1      X, Y, Z:  13.8  56.35  24.98
2.4  Seg length ending at pt. 216 >= 6.0 stdevs above mean at 1.1635.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
2.5  Seg length ending at pt. 541 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  23.45  51.09  37.2
2.4  Seg length ending at pt. 1310 >= 6.0 stdevs above mean at 1.6952.  (no action taken)
     B1      X, Y, Z:  13.06  56.03  24.3
2.7  Line 7 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  13.23  56.18  25.98
2.7  Line 216 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  13.23  56.18  25.98
2.7  Line 1309 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  13.23  56.18  25.98
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  13.23  56.18  25.98
2.6  Line 4 and line 6 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  13.34  56.28  26.15
2.1  Line 540 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  23.42  51.07  37.15
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
