# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_16.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_16.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  235.8  106.9  42.17
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  236.0  106.59  42.01
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  235.8  106.9  42.17
4.5  Radius of terminal line 782 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  235.8  106.9  42.17
2.4  Seg length ending at pt. 294 >= 6.0 stdevs above mean at 1.1808.  (no action taken)
     B1      X, Y, Z:  229.3  112.79  20.62
2.4  Seg length ending at pt. 783 >= 6.0 stdevs above mean at 1.1885.  (no action taken)
     B1      X, Y, Z:  236.69  106.79  42.95
2.7  Line 782 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  235.8  106.9  42.17
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  235.8  106.9  42.17
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
