# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_13.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN9_microglia_13.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  234.09  6.79  50.34
4.3  Radius of line 2 at 3.081 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  234.19  7.06  50.32
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  234.09  6.79  50.34
4.3  Radius of line 4 at 2.813 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  233.8  5.9  50.59
4.5  Radius of terminal line 131 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  234.09  6.79  50.34
4.3  Radius of line 221 at 2.918 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  234.19  7.36  50.36
2.4  Seg length ending at pt. 142 >= 6.0 stdevs above mean at 1.1692.  (no action taken)
     B1      X, Y, Z:  237.3  6.41  44.77
2.4  Seg length ending at pt. 242 >= 6.0 stdevs above mean at 1.2898.  (no action taken)
     B1      X, Y, Z:  235.5  13.16  46.54
2.7  Line 131 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  234.09  6.79  50.34
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  234.09  6.79  50.34
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
