# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_9.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_9.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  227.4  84.26  38.35
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.4  84.26  38.35
4.5  Radius of terminal line 169 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.4  84.26  38.35
2.4  Seg length ending at pt. 171 >= 6.0 stdevs above mean at 1.7924.  (no action taken)
     B1      X, Y, Z:  227.9  85.14  39.5
2.4  Seg length ending at pt. 172 >= 6.0 stdevs above mean at 1.105.  (no action taken)
     B1      X, Y, Z:  228.09  85.34  40.57
2.5  Seg length ending at pt. 1273 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  237.25  58.64  25.05
2.5  Seg length ending at pt. 1392 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  224.0  55.06  37.82
2.7  Line 169 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  227.4  84.26  38.35
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  227.4  84.26  38.35
2.1  Line 1272 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  237.3  58.71  25.01
2.1  Line 1391 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  224.09  55.03  37.82
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
