# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  144.9  172.09  31.37
4.3  Radius of line 2 at 3.156 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.09  172.4  31.42
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.9  172.09  31.37
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.65  172.09  30.86
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.9  172.09  31.37
2.4  Seg length ending at pt. 7 >= 6.0 stdevs above mean at 1.6705.  (no action taken)
     B1      X, Y, Z:  143.9  172.0  32.35
2.4  Seg length ending at pt. 1151 >= 6.0 stdevs above mean at 1.9391.  (no action taken)
     B1      X, Y, Z:  145.09  173.0  32.15
2.4  Seg length ending at pt. 1833 >= 6.0 stdevs above mean at 1.2092.  (no action taken)
     B1      X, Y, Z:  156.5  174.19  17.58
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  144.9  172.09  31.37
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  144.9  172.09  31.37
2.6  Line 1303 and line 1333 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  146.9  186.69  41.03
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
