# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_28.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_28.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  54.46  220.59  35.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.79  220.37  35.67
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.68  220.44  35.61
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.46  220.59  35.5
4.5  Radius of terminal line 326 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.46  220.59  35.5
2.4  Seg length ending at pt. 6 >= 6.0 stdevs above mean at 1.1372.  (no action taken)
     B1      X, Y, Z:  54.78  221.09  34.53
2.4  Seg length ending at pt. 326 >= 6.0 stdevs above mean at 1.1372.  (no action taken)
     B1      X, Y, Z:  54.46  220.59  35.5
2.5  Seg length ending at pt. 503 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  51.74  210.27  44.03
2.7  Line 326 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  54.46  220.59  35.5
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  54.46  220.59  35.5
2.1  Line 502 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  51.77  210.34  44.06
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
