# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  59.75  270.3  24.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.64  270.1  24.55
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.75  270.3  24.5
4.5  Radius of terminal line 1344 at 0.172 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  43.43  273.69  34.74
2.4  Seg length ending at pt. 118 >= 6.0 stdevs above mean at 1.2093.  (no action taken)
     B1      X, Y, Z:  58.96  270.1  25.55
2.5  Seg length ending at pt. 797 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  41.98  270.89  25.88
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  59.75  270.3  24.5
2.1  Line 796 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  42.03  270.89  25.94
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
