# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  200.5  251.0  37.49
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.5  251.0  37.49
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.59  251.25  37.34
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.5  251.0  37.49
2.4  Seg length ending at pt. 195 >= 6.0 stdevs above mean at 1.4057.  (no action taken)
     B1      X, Y, Z:  200.19  251.69  38.5
2.4  Seg length ending at pt. 244 >= 6.0 stdevs above mean at 1.1904.  (no action taken)
     B1      X, Y, Z:  201.19  251.0  38.46
2.4  Seg length ending at pt. 534 >= 6.0 stdevs above mean at 1.1893.  (no action taken)
     B1      X, Y, Z:  205.8  239.19  31.21
2.4  Seg length ending at pt. 802 >= 6.0 stdevs above mean at 1.2034.  (no action taken)
     B1      X, Y, Z:  205.4  249.0  14.65
2.4  Seg length ending at pt. 1184 >= 6.0 stdevs above mean at 1.1423.  (no action taken)
     B1      X, Y, Z:  200.69  250.9  19.75
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  200.5  251.0  37.49
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.5  251.0  37.49
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
