# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_1.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN8_microglia_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  191.9  183.5  25.51
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.1  183.59  25.42
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  191.9  183.5  25.51
4.5  Radius of terminal line 2950 at 0.16 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.0  214.3  0.78
2.5  Seg length ending at pt. 510 <= 0.1 at 0.0721.  (removed)
     A       X, Y, Z:  189.9  191.14  39.23
2.4  Seg length ending at pt. 516 >= 6.0 stdevs above mean at 3.9828.  (no action taken)
     B1      X, Y, Z:  189.69  191.5  39.17
2.4  Seg length ending at pt. 923 >= 6.0 stdevs above mean at 1.1197.  (no action taken)
     B1      X, Y, Z:  183.69  184.69  32.21
2.4  Seg length ending at pt. 1468 >= 6.0 stdevs above mean at 1.1082.  (no action taken)
     B1      X, Y, Z:  189.4  186.0  13.68
2.4  Seg length ending at pt. 1922 >= 6.0 stdevs above mean at 1.2002.  (no action taken)
     B1      X, Y, Z:  199.8  189.5  40.35
2.5  Seg length ending at pt. 2055 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  211.08  196.0  28.79
2.5  Seg length ending at pt. 2057 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  211.19  196.0  28.76
2.4  Seg length ending at pt. 2202 >= 6.0 stdevs above mean at 1.1714.  (no action taken)
     B1      X, Y, Z:  214.69  185.09  4.82
2.4  Seg length ending at pt. 2481 >= 6.0 stdevs above mean at 1.118.  (no action taken)
     B1      X, Y, Z:  201.5  186.59  18.07
2.5  Seg length ending at pt. 2056 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  211.12  196.0  28.78
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  191.9  183.5  25.51
2.1  Line 2054 has 4 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  211.05  196.0  28.81
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
