# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_26.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_26.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  10.0  96.81  22.1
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  10.0  96.81  22.1
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  10.11  96.85  21.84
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  10.0  96.81  22.1
2.4  Seg length ending at pt. 7 >= 6.0 stdevs above mean at 1.2851.  (no action taken)
     B1      X, Y, Z:  10.16  97.04  20.57
2.4  Seg length ending at pt. 333 >= 6.0 stdevs above mean at 1.1724.  (no action taken)
     B1      X, Y, Z:  13.24  96.42  22.23
2.4  Seg length ending at pt. 529 >= 6.0 stdevs above mean at 1.1732.  (no action taken)
     B1      X, Y, Z:  22.46  95.0  36.42
2.4  Seg length ending at pt. 1161 >= 6.0 stdevs above mean at 1.4563.  (no action taken)
     B1      X, Y, Z:  9.92  96.2  23.42
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  10.0  96.81  22.1
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  10.0  96.81  22.1
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
