# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_10.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_10.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  85.54  269.3  16.96
4.3  Radius of line 2 at 3.133 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.6  269.0  16.32
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.6  269.03  16.4
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.59  269.07  16.48
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.57  269.14  16.64
4.3  Radius of line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.54  269.3  16.96
4.3  Radius of line 1082 at 3.032 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  85.6  268.6  16.17
4.5  Radius of terminal line 2609 at 0.157 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  107.09  240.5  24.44
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0854.  (removed)
     A       X, Y, Z:  85.6  269.03  16.4
2.4  Seg length ending at pt. 40 >= 6.0 stdevs above mean at 1.1316.  (no action taken)
     B1      X, Y, Z:  85.04  269.0  15.65
2.4  Seg length ending at pt. 163 >= 6.0 stdevs above mean at 1.2147.  (no action taken)
     B1      X, Y, Z:  86.15  269.8  17.05
2.4  Seg length ending at pt. 1523 >= 6.0 stdevs above mean at 1.2289.  (no action taken)
     B1      X, Y, Z:  110.4  264.5  20.64
2.6  Line 1 and line 6 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  85.54  269.3  16.96
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  85.6  269.0  16.32
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
