# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_1.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN7_microglia_1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  114.7  169.9  2.0
4.5  Radius of terminal line 1216 at 0.162 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  91.95  155.69  27.46
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 1.1316.  (no action taken)
     B1      X, Y, Z:  114.29  170.8  2.55
2.5  Seg length ending at pt. 378 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  114.77  169.07  1.93
2.4  Seg length ending at pt. 400 >= 6.0 stdevs above mean at 1.2161.  (no action taken)
     B1      X, Y, Z:  115.09  169.8  2.94
2.5  Seg length ending at pt. 509 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  122.8  173.5  2.85
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  114.7  169.9  2.0
2.1  Line 377 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.75  169.15  1.97
2.1  Line 508 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  122.7  173.5  2.85
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
