# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  130.09  278.39  34.32
4.3  Radius of line 2 at 3.05 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.0  278.8  34.43
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.09  278.39  34.32
4.5  Radius of terminal line 630 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.09  278.39  34.32
4.3  Radius of line 631 at 2.971 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  129.69  278.89  33.5
2.5  Seg length ending at pt. 228 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  119.2  281.6  42.5
2.4  Seg length ending at pt. 633 >= 6.0 stdevs above mean at 1.1596.  (no action taken)
     B1      X, Y, Z:  129.4  278.89  32.82
2.4  Seg length ending at pt. 1225 >= 6.0 stdevs above mean at 1.1715.  (no action taken)
     B1      X, Y, Z:  148.69  282.0  14.81
2.4  Seg length ending at pt. 1495 >= 6.0 stdevs above mean at 1.1909.  (no action taken)
     B1      X, Y, Z:  131.59  278.3  25.8
2.4  Seg length ending at pt. 1737 >= 6.0 stdevs above mean at 1.1687.  (no action taken)
     B1      X, Y, Z:  133.59  278.1  42.06
2.7  Line 630 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  130.09  278.39  34.32
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  130.09  278.39  34.32
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
