# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_28.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_28.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  64.68  229.5  22.5
4.5  Radius of terminal line 299 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.68  229.5  22.5
4.5  Radius of terminal line 472 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  64.68  229.5  22.5
2.5  Seg length ending at pt. 220 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  56.98  206.35  33.44
2.4  Seg length ending at pt. 473 >= 6.0 stdevs above mean at 1.1587.  (no action taken)
     B1      X, Y, Z:  65.04  230.09  21.57
2.4  Seg length ending at pt. 549 >= 6.0 stdevs above mean at 1.0387.  (no action taken)
     B1      X, Y, Z:  66.17  236.09  5.96
2.4  Seg length ending at pt. 1076 >= 6.0 stdevs above mean at 1.0197.  (no action taken)
     B1      X, Y, Z:  93.64  236.0  5.86
2.7  Line 299 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  64.68  229.5  22.5
2.7  Line 472 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  64.68  229.5  22.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  64.68  229.5  22.5
2.1  Line 219 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  57.02  206.4  33.44
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
