# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  152.3  67.42  13.05
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.3  67.03  13.54
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.3  67.15  13.38
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.3  67.42  13.05
4.5  Radius of terminal line 1400 at 0.164 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  159.59  39.59  21.46
2.5  Seg length ending at pt. 81 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  158.14  74.68  9.66
2.4  Seg length ending at pt. 478 >= 6.0 stdevs above mean at 1.0605.  (no action taken)
     B1      X, Y, Z:  153.19  65.78  18.12
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  152.3  67.42  13.05
2.1  Line 80 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  158.09  74.62  9.7
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
