# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_15.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN6_microglia_15.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  155.8  104.2  47.0
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  155.8  104.2  47.0
4.5  Radius of terminal line 1670 at 0.223 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  162.4  96.84  43.21
2.4  Seg length ending at pt. 24 >= 6.0 stdevs above mean at 1.0657.  (no action taken)
     B1      X, Y, Z:  153.4  101.79  37.89
2.4  Seg length ending at pt. 450 >= 6.0 stdevs above mean at 1.0458.  (no action taken)
     B1      X, Y, Z:  138.09  109.59  34.81
2.5  Seg length ending at pt. 1011 <= 0.1 at 0.0539.  (removed)
     A       X, Y, Z:  164.35  121.77  34.15
2.4  Seg length ending at pt. 1091 >= 6.0 stdevs above mean at 1.3267.  (no action taken)
     B1      X, Y, Z:  156.3  103.7  45.09
2.5  Seg length ending at pt. 1219 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  162.09  98.62  46.34
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  155.8  104.2  47.0
2.6  Line 492 and line 502 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  135.69  110.59  33.14
2.1  Line 1010 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  164.3  121.75  34.15
2.1  Line 1218 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  162.0  98.65  46.32
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
