# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  271.5  89.37  15.49
4.5  Radius of terminal line 557 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  271.5  89.37  15.49
4.5  Radius of terminal line 955 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  271.5  89.37  15.49
2.4  Seg length ending at pt. 157 >= 6.0 stdevs above mean at 1.2277.  (no action taken)
     B1      X, Y, Z:  285.39  90.78  32.42
2.4  Seg length ending at pt. 558 >= 6.0 stdevs above mean at 1.4856.  (no action taken)
     B1      X, Y, Z:  271.5  89.4  16.87
2.4  Seg length ending at pt. 955 >= 6.0 stdevs above mean at 1.3803.  (no action taken)
     B1      X, Y, Z:  271.5  89.37  15.49
2.7  Line 557 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  271.5  89.37  15.49
2.7  Line 955 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  271.5  89.37  15.49
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  271.5  89.37  15.49
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
