# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_39.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_39.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  224.59  285.3  27.96
4.3  Radius of line 2 at 3.157 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  224.9  285.0  27.57
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  224.59  285.3  27.96
4.5  Radius of terminal line 2342 at 0.158 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  241.19  292.89  12.42
2.4  Seg length ending at pt. 483 >= 6.0 stdevs above mean at 1.0667.  (no action taken)
     B1      X, Y, Z:  216.4  281.19  27.39
2.4  Seg length ending at pt. 931 >= 6.0 stdevs above mean at 0.9965.  (no action taken)
     B1      X, Y, Z:  230.8  285.3  34.0
2.5  Seg length ending at pt. 1401 <= 0.1 at 0.051.  (removed)
     A       X, Y, Z:  231.35  289.5  27.84
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  224.59  285.3  27.96
2.1  Line 1400 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  231.3  289.5  27.83
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
