# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_32.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_32.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  142.59  195.5  46.35
4.3  Radius of line 2 at 3.074 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  143.0  195.4  45.75
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  142.8  195.44  46.05
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  142.59  195.5  46.35
4.5  Radius of terminal line 1732 at 0.159 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  154.5  190.9  18.46
2.5  Seg length ending at pt. 754 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  141.4  186.69  37.74
2.4  Seg length ending at pt. 1174 >= 6.0 stdevs above mean at 1.2175.  (no action taken)
     B1      X, Y, Z:  145.8  184.0  27.44
2.5  Seg length ending at pt. 1215 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  143.09  192.59  23.69
2.5  Seg length ending at pt. 1560 <= 0.1 at 0.02.  (removed)
     A       X, Y, Z:  146.9  201.75  23.23
2.4  Seg length ending at pt. 1569 >= 6.0 stdevs above mean at 1.6645.  (no action taken)
     B1      X, Y, Z:  146.8  201.69  23.98
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  142.59  195.5  46.35
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
